Gene : Medtr2g091315 M. truncatula Mt4.0v1
Defline:  (1 of 11) KOG1003 - Actin filament-coating protein tropomyosin Description:  COP1-interactive protein, putative
Genomic Order:  5000 Name:  ? Medtr2g091315
Secondary Identifier:  ? PAC:31065907
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g091315 0.5kb upstream 0.5kb upstream 2288 true chr2: 39449638-39451925 Medicago truncatula
Medtr2g091315 0.5kb upstream 0.5kb upstream 500 false chr2: 39449638-39450137 Medicago truncatula
Medtr2g091315 0.5kb downstream 0.5kb downstream 2288 true chr2: 39450138-39452425 Medicago truncatula
Medtr2g091315 0.5kb downstream 0.5kb downstream 500 false chr2: 39451926-39452425 Medicago truncatula
Medtr2g091315 1.0kb upstream 1.0kb upstream 2788 true chr2: 39449138-39451925 Medicago truncatula
Medtr2g091315 1.0kb upstream 1.0kb upstream 1000 false chr2: 39449138-39450137 Medicago truncatula
Medtr2g091315 1.0kb downstream 1.0kb downstream 2788 true chr2: 39450138-39452925 Medicago truncatula
Medtr2g091315 1.0kb downstream 1.0kb downstream 1000 false chr2: 39451926-39452925 Medicago truncatula
Medtr2g091315 2.0kb upstream 2.0kb upstream 3788 true chr2: 39448138-39451925 Medicago truncatula
Medtr2g091315 2.0kb upstream 2.0kb upstream 2000 false chr2: 39448138-39450137 Medicago truncatula
Medtr2g091315 2.0kb downstream 2.0kb downstream 3788 true chr2: 39450138-39453925 Medicago truncatula
Medtr2g091315 2.0kb downstream 2.0kb downstream 2000 false chr2: 39451926-39453925 Medicago truncatula
Medtr2g091315 5.0kb upstream 5.0kb upstream 6788 true chr2: 39445138-39451925 Medicago truncatula
Medtr2g091315 5.0kb upstream 5.0kb upstream 5000 false chr2: 39445138-39450137 Medicago truncatula
Medtr2g091315 5.0kb downstream 5.0kb downstream 6788 true chr2: 39450138-39456925 Medicago truncatula
Medtr2g091315 5.0kb downstream 5.0kb downstream 5000 false chr2: 39451926-39456925 Medicago truncatula
Medtr2g091315 10.0kb upstream 10.0kb upstream 11788 true chr2: 39440138-39451925 Medicago truncatula
Medtr2g091315 10.0kb upstream 10.0kb upstream 10000 false chr2: 39440138-39450137 Medicago truncatula
Medtr2g091315 10.0kb downstream 10.0kb downstream 11788 true chr2: 39450138-39461925 Medicago truncatula
Medtr2g091315 10.0kb downstream 10.0kb downstream 10000 false chr2: 39451926-39461925 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315193 5265 Fabidae View MSA
124070954 5270 Rosid View MSA
123752761 5271 Pentapetalae View MSA
122774770 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.332        
cufflinks 0.292        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.036       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.245        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain