Gene : Medtr2g091260 M. truncatula Mt4.0v1
Defline:  (1 of 42) PF07899 - Frigida-like protein (Frigida) Description:  frigida-LIKE protein
Genomic Order:  4995 Name:  ? Medtr2g091260
Secondary Identifier:  ? PAC:31068483
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g091260 0.5kb upstream 0.5kb upstream 5213 true chr2: 39395750-39400962 Medicago truncatula
Medtr2g091260 0.5kb upstream 0.5kb upstream 500 false chr2: 39400463-39400962 Medicago truncatula
Medtr2g091260 0.5kb downstream 0.5kb downstream 5213 true chr2: 39395250-39400462 Medicago truncatula
Medtr2g091260 0.5kb downstream 0.5kb downstream 500 false chr2: 39395250-39395749 Medicago truncatula
Medtr2g091260 1.0kb upstream 1.0kb upstream 5713 true chr2: 39395750-39401462 Medicago truncatula
Medtr2g091260 1.0kb upstream 1.0kb upstream 1000 false chr2: 39400463-39401462 Medicago truncatula
Medtr2g091260 1.0kb downstream 1.0kb downstream 5713 true chr2: 39394750-39400462 Medicago truncatula
Medtr2g091260 1.0kb downstream 1.0kb downstream 1000 false chr2: 39394750-39395749 Medicago truncatula
Medtr2g091260 2.0kb upstream 2.0kb upstream 6713 true chr2: 39395750-39402462 Medicago truncatula
Medtr2g091260 2.0kb upstream 2.0kb upstream 2000 false chr2: 39400463-39402462 Medicago truncatula
Medtr2g091260 2.0kb downstream 2.0kb downstream 6713 true chr2: 39393750-39400462 Medicago truncatula
Medtr2g091260 2.0kb downstream 2.0kb downstream 2000 false chr2: 39393750-39395749 Medicago truncatula
Medtr2g091260 5.0kb upstream 5.0kb upstream 9713 true chr2: 39395750-39405462 Medicago truncatula
Medtr2g091260 5.0kb upstream 5.0kb upstream 5000 false chr2: 39400463-39405462 Medicago truncatula
Medtr2g091260 5.0kb downstream 5.0kb downstream 9713 true chr2: 39390750-39400462 Medicago truncatula
Medtr2g091260 5.0kb downstream 5.0kb downstream 5000 false chr2: 39390750-39395749 Medicago truncatula
Medtr2g091260 10.0kb upstream 10.0kb upstream 14713 true chr2: 39395750-39410462 Medicago truncatula
Medtr2g091260 10.0kb upstream 10.0kb upstream 10000 false chr2: 39400463-39410462 Medicago truncatula
Medtr2g091260 10.0kb downstream 10.0kb downstream 14713 true chr2: 39385750-39400462 Medicago truncatula
Medtr2g091260 10.0kb downstream 10.0kb downstream 10000 false chr2: 39385750-39395749 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315193 5265 Fabidae View MSA
124070954 5270 Rosid View MSA
123752761 5271 Pentapetalae View MSA
122774770 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.236        
cufflinks 13.635     High  
cufflinks 11.426     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.072        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low Low
cufflinks 11.317     High  
cufflinks 0.015     Low Low

0 Strain