Gene : Medtr2g096560 M. truncatula Mt4.0v1
Defline:  (1 of 243) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Description:  RNA-binding (RRM/RBD/RNP motif) family protein
Genomic Order:  5223 Name:  ? Medtr2g096560
Secondary Identifier:  ? PAC:31067390
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g096560 0.5kb upstream 0.5kb upstream 3107 true chr2: 41239536-41242642 Medicago truncatula
Medtr2g096560 0.5kb upstream 0.5kb upstream 500 false chr2: 41239536-41240035 Medicago truncatula
Medtr2g096560 0.5kb downstream 0.5kb downstream 3107 true chr2: 41240036-41243142 Medicago truncatula
Medtr2g096560 0.5kb downstream 0.5kb downstream 500 false chr2: 41242643-41243142 Medicago truncatula
Medtr2g096560 1.0kb upstream 1.0kb upstream 3607 true chr2: 41239036-41242642 Medicago truncatula
Medtr2g096560 1.0kb upstream 1.0kb upstream 1000 false chr2: 41239036-41240035 Medicago truncatula
Medtr2g096560 1.0kb downstream 1.0kb downstream 3607 true chr2: 41240036-41243642 Medicago truncatula
Medtr2g096560 1.0kb downstream 1.0kb downstream 1000 false chr2: 41242643-41243642 Medicago truncatula
Medtr2g096560 2.0kb upstream 2.0kb upstream 4607 true chr2: 41238036-41242642 Medicago truncatula
Medtr2g096560 2.0kb upstream 2.0kb upstream 2000 false chr2: 41238036-41240035 Medicago truncatula
Medtr2g096560 2.0kb downstream 2.0kb downstream 4607 true chr2: 41240036-41244642 Medicago truncatula
Medtr2g096560 2.0kb downstream 2.0kb downstream 2000 false chr2: 41242643-41244642 Medicago truncatula
Medtr2g096560 5.0kb upstream 5.0kb upstream 7607 true chr2: 41235036-41242642 Medicago truncatula
Medtr2g096560 5.0kb upstream 5.0kb upstream 5000 false chr2: 41235036-41240035 Medicago truncatula
Medtr2g096560 5.0kb downstream 5.0kb downstream 7607 true chr2: 41240036-41247642 Medicago truncatula
Medtr2g096560 5.0kb downstream 5.0kb downstream 5000 false chr2: 41242643-41247642 Medicago truncatula
Medtr2g096560 10.0kb upstream 10.0kb upstream 12607 true chr2: 41230036-41242642 Medicago truncatula
Medtr2g096560 10.0kb upstream 10.0kb upstream 10000 false chr2: 41230036-41240035 Medicago truncatula
Medtr2g096560 10.0kb downstream 10.0kb downstream 12607 true chr2: 41240036-41252642 Medicago truncatula
Medtr2g096560 10.0kb downstream 10.0kb downstream 10000 false chr2: 41242643-41252642 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301038 5265 Fabidae View MSA
124061661 5270 Rosid View MSA
123747843 5271 Pentapetalae View MSA
122790614 5272 Eudicot View MSA
122044868 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.018       High
cufflinks 1.361       Low
cufflinks 1.829        
cufflinks 2.795        
cufflinks 1.814        
cufflinks 2.115        
cufflinks 3.784       High
cufflinks 1.566        
cufflinks 2.682        

0 Strain