Gene : Medtr2g096340 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11620//PTHR11620:SF14 - 60S RIBOSOMAL PROTEIN L23A Description:  60S ribosomal protein L23a-2
Genomic Order:  5209 Name:  ? Medtr2g096340
Secondary Identifier:  ? PAC:31062152
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g096340 0.5kb upstream 0.5kb upstream 3060 true chr2: 41153411-41156470 Medicago truncatula
Medtr2g096340 0.5kb upstream 0.5kb upstream 500 false chr2: 41153411-41153910 Medicago truncatula
Medtr2g096340 0.5kb downstream 0.5kb downstream 3060 true chr2: 41153911-41156970 Medicago truncatula
Medtr2g096340 0.5kb downstream 0.5kb downstream 500 false chr2: 41156471-41156970 Medicago truncatula
Medtr2g096340 1.0kb upstream 1.0kb upstream 3560 true chr2: 41152911-41156470 Medicago truncatula
Medtr2g096340 1.0kb upstream 1.0kb upstream 1000 false chr2: 41152911-41153910 Medicago truncatula
Medtr2g096340 1.0kb downstream 1.0kb downstream 3560 true chr2: 41153911-41157470 Medicago truncatula
Medtr2g096340 1.0kb downstream 1.0kb downstream 1000 false chr2: 41156471-41157470 Medicago truncatula
Medtr2g096340 2.0kb upstream 2.0kb upstream 4560 true chr2: 41151911-41156470 Medicago truncatula
Medtr2g096340 2.0kb upstream 2.0kb upstream 2000 false chr2: 41151911-41153910 Medicago truncatula
Medtr2g096340 2.0kb downstream 2.0kb downstream 4560 true chr2: 41153911-41158470 Medicago truncatula
Medtr2g096340 2.0kb downstream 2.0kb downstream 2000 false chr2: 41156471-41158470 Medicago truncatula
Medtr2g096340 5.0kb upstream 5.0kb upstream 7560 true chr2: 41148911-41156470 Medicago truncatula
Medtr2g096340 5.0kb upstream 5.0kb upstream 5000 false chr2: 41148911-41153910 Medicago truncatula
Medtr2g096340 5.0kb downstream 5.0kb downstream 7560 true chr2: 41153911-41161470 Medicago truncatula
Medtr2g096340 5.0kb downstream 5.0kb downstream 5000 false chr2: 41156471-41161470 Medicago truncatula
Medtr2g096340 10.0kb upstream 10.0kb upstream 12560 true chr2: 41143911-41156470 Medicago truncatula
Medtr2g096340 10.0kb upstream 10.0kb upstream 10000 false chr2: 41143911-41153910 Medicago truncatula
Medtr2g096340 10.0kb downstream 10.0kb downstream 12560 true chr2: 41153911-41166470 Medicago truncatula
Medtr2g096340 10.0kb downstream 10.0kb downstream 10000 false chr2: 41156471-41166470 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315036 5265 Fabidae View MSA
124072262 5270 Rosid View MSA
123746910 5271 Pentapetalae View MSA
122787789 5272 Eudicot View MSA
122048184 5273 Angiosperm View MSA
121343898 5274 Embryophyte View MSA
123423801 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.083     High Low
cufflinks 19.748     High  
cufflinks 20.868     High  
cufflinks 33.691     High High
cufflinks 33.821     High High
cufflinks 19.868     High  
cufflinks 34.894     High High
cufflinks 25.067     High  
cufflinks 30.577     High  

0 Strain