Gene : Medtr3g045190 M. truncatula Mt4.0v1
Defline:  (1 of 72) PF03168 - Late embryogenesis abundant protein (LEA_2) Description:  late embryogenesis abundant protein
Genomic Order:  1639 Name:  ? Medtr3g045190
Secondary Identifier:  ? PAC:31053554
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g045190 0.5kb upstream 0.5kb upstream 3672 true chr3: 14617623-14621294 Medicago truncatula
Medtr3g045190 0.5kb upstream 0.5kb upstream 500 false chr3: 14617623-14618122 Medicago truncatula
Medtr3g045190 0.5kb downstream 0.5kb downstream 3672 true chr3: 14618123-14621794 Medicago truncatula
Medtr3g045190 0.5kb downstream 0.5kb downstream 500 false chr3: 14621295-14621794 Medicago truncatula
Medtr3g045190 1.0kb upstream 1.0kb upstream 4172 true chr3: 14617123-14621294 Medicago truncatula
Medtr3g045190 1.0kb upstream 1.0kb upstream 1000 false chr3: 14617123-14618122 Medicago truncatula
Medtr3g045190 1.0kb downstream 1.0kb downstream 4172 true chr3: 14618123-14622294 Medicago truncatula
Medtr3g045190 1.0kb downstream 1.0kb downstream 1000 false chr3: 14621295-14622294 Medicago truncatula
Medtr3g045190 2.0kb upstream 2.0kb upstream 5172 true chr3: 14616123-14621294 Medicago truncatula
Medtr3g045190 2.0kb upstream 2.0kb upstream 2000 false chr3: 14616123-14618122 Medicago truncatula
Medtr3g045190 2.0kb downstream 2.0kb downstream 5172 true chr3: 14618123-14623294 Medicago truncatula
Medtr3g045190 2.0kb downstream 2.0kb downstream 2000 false chr3: 14621295-14623294 Medicago truncatula
Medtr3g045190 5.0kb upstream 5.0kb upstream 8172 true chr3: 14613123-14621294 Medicago truncatula
Medtr3g045190 5.0kb upstream 5.0kb upstream 5000 false chr3: 14613123-14618122 Medicago truncatula
Medtr3g045190 5.0kb downstream 5.0kb downstream 8172 true chr3: 14618123-14626294 Medicago truncatula
Medtr3g045190 5.0kb downstream 5.0kb downstream 5000 false chr3: 14621295-14626294 Medicago truncatula
Medtr3g045190 10.0kb upstream 10.0kb upstream 13172 true chr3: 14608123-14621294 Medicago truncatula
Medtr3g045190 10.0kb upstream 10.0kb upstream 10000 false chr3: 14608123-14618122 Medicago truncatula
Medtr3g045190 10.0kb downstream 10.0kb downstream 13172 true chr3: 14618123-14631294 Medicago truncatula
Medtr3g045190 10.0kb downstream 10.0kb downstream 10000 false chr3: 14621295-14631294 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309281 5265 Fabidae View MSA
124066390 5270 Rosid View MSA
123747844 5271 Pentapetalae View MSA
122788467 5272 Eudicot View MSA
122045066 5273 Angiosperm View MSA
121350373 5274 Embryophyte View MSA
123381702 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.939        
cufflinks 10.668     High  
cufflinks 14.161     High High
cufflinks 2.056       Low
cufflinks 11.026     High  
cufflinks 2.95       Low
cufflinks 6.642        
cufflinks 11.226     High  
cufflinks 4.795        

0 Strain