Gene : Medtr3g045440 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10992//PTHR10992:SF841 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN Description:  sigma factor sigb regulation rsbq-like protein
Genomic Order:  1650 Name:  ? Medtr3g045440
Secondary Identifier:  ? PAC:31054962
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g045440 0.5kb upstream 0.5kb upstream 2219 true chr3: 14781798-14784016 Medicago truncatula
Medtr3g045440 0.5kb upstream 0.5kb upstream 500 false chr3: 14783517-14784016 Medicago truncatula
Medtr3g045440 0.5kb downstream 0.5kb downstream 2219 true chr3: 14781298-14783516 Medicago truncatula
Medtr3g045440 0.5kb downstream 0.5kb downstream 500 false chr3: 14781298-14781797 Medicago truncatula
Medtr3g045440 1.0kb upstream 1.0kb upstream 2719 true chr3: 14781798-14784516 Medicago truncatula
Medtr3g045440 1.0kb upstream 1.0kb upstream 1000 false chr3: 14783517-14784516 Medicago truncatula
Medtr3g045440 1.0kb downstream 1.0kb downstream 2719 true chr3: 14780798-14783516 Medicago truncatula
Medtr3g045440 1.0kb downstream 1.0kb downstream 1000 false chr3: 14780798-14781797 Medicago truncatula
Medtr3g045440 2.0kb upstream 2.0kb upstream 3719 true chr3: 14781798-14785516 Medicago truncatula
Medtr3g045440 2.0kb upstream 2.0kb upstream 2000 false chr3: 14783517-14785516 Medicago truncatula
Medtr3g045440 2.0kb downstream 2.0kb downstream 3719 true chr3: 14779798-14783516 Medicago truncatula
Medtr3g045440 2.0kb downstream 2.0kb downstream 2000 false chr3: 14779798-14781797 Medicago truncatula
Medtr3g045440 5.0kb upstream 5.0kb upstream 6719 true chr3: 14781798-14788516 Medicago truncatula
Medtr3g045440 5.0kb upstream 5.0kb upstream 5000 false chr3: 14783517-14788516 Medicago truncatula
Medtr3g045440 5.0kb downstream 5.0kb downstream 6719 true chr3: 14776798-14783516 Medicago truncatula
Medtr3g045440 5.0kb downstream 5.0kb downstream 5000 false chr3: 14776798-14781797 Medicago truncatula
Medtr3g045440 10.0kb upstream 10.0kb upstream 11719 true chr3: 14781798-14793516 Medicago truncatula
Medtr3g045440 10.0kb upstream 10.0kb upstream 10000 false chr3: 14783517-14793516 Medicago truncatula
Medtr3g045440 10.0kb downstream 10.0kb downstream 11719 true chr3: 14771798-14783516 Medicago truncatula
Medtr3g045440 10.0kb downstream 10.0kb downstream 10000 false chr3: 14771798-14781797 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298201 5265 Fabidae View MSA
124066716 5270 Rosid View MSA
123750652 5271 Pentapetalae View MSA
122793074 5272 Eudicot View MSA
122048522 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121350361 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low  
cufflinks 0.062     Low  
cufflinks 0.259       High

0 Strain