Gene : Medtr3g051270 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12854//PTHR12854:SF12 - ATAXIN 2-RELATED Description:  SM domain found in ataxin-2 protein
Genomic Order:  2065 Name:  ? Medtr3g051270
Secondary Identifier:  ? PAC:31054274
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g051270 0.5kb upstream 0.5kb upstream 11114 true chr3: 20227230-20238343 Medicago truncatula
Medtr3g051270 0.5kb upstream 0.5kb upstream 500 false chr3: 20227230-20227729 Medicago truncatula
Medtr3g051270 0.5kb downstream 0.5kb downstream 11114 true chr3: 20227730-20238843 Medicago truncatula
Medtr3g051270 0.5kb downstream 0.5kb downstream 500 false chr3: 20238344-20238843 Medicago truncatula
Medtr3g051270 1.0kb upstream 1.0kb upstream 11614 true chr3: 20226730-20238343 Medicago truncatula
Medtr3g051270 1.0kb upstream 1.0kb upstream 1000 false chr3: 20226730-20227729 Medicago truncatula
Medtr3g051270 1.0kb downstream 1.0kb downstream 11614 true chr3: 20227730-20239343 Medicago truncatula
Medtr3g051270 1.0kb downstream 1.0kb downstream 1000 false chr3: 20238344-20239343 Medicago truncatula
Medtr3g051270 2.0kb upstream 2.0kb upstream 12614 true chr3: 20225730-20238343 Medicago truncatula
Medtr3g051270 2.0kb upstream 2.0kb upstream 2000 false chr3: 20225730-20227729 Medicago truncatula
Medtr3g051270 2.0kb downstream 2.0kb downstream 12614 true chr3: 20227730-20240343 Medicago truncatula
Medtr3g051270 2.0kb downstream 2.0kb downstream 2000 false chr3: 20238344-20240343 Medicago truncatula
Medtr3g051270 5.0kb upstream 5.0kb upstream 15614 true chr3: 20222730-20238343 Medicago truncatula
Medtr3g051270 5.0kb upstream 5.0kb upstream 5000 false chr3: 20222730-20227729 Medicago truncatula
Medtr3g051270 5.0kb downstream 5.0kb downstream 15614 true chr3: 20227730-20243343 Medicago truncatula
Medtr3g051270 5.0kb downstream 5.0kb downstream 5000 false chr3: 20238344-20243343 Medicago truncatula
Medtr3g051270 10.0kb upstream 10.0kb upstream 20614 true chr3: 20217730-20238343 Medicago truncatula
Medtr3g051270 10.0kb upstream 10.0kb upstream 10000 false chr3: 20217730-20227729 Medicago truncatula
Medtr3g051270 10.0kb downstream 10.0kb downstream 20614 true chr3: 20227730-20248343 Medicago truncatula
Medtr3g051270 10.0kb downstream 10.0kb downstream 10000 false chr3: 20238344-20248343 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299902 5265 Fabidae View MSA
124064647 5270 Rosid View MSA
123736552 5271 Pentapetalae View MSA
122787256 5272 Eudicot View MSA
122047595 5273 Angiosperm View MSA
121310768 5274 Embryophyte View MSA
123348174 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.486       High
cufflinks 0.254        
cufflinks 0.222        
cufflinks 0.261        
cufflinks 0.34        
cufflinks 0.094     Low Low
cufflinks 0.304        
cufflinks 0.18        
cufflinks 0.355        

0 Strain