Gene : Medtr3g053650 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR21320:SF3 - CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11, MITOCHONDRIAL Description:  cytochrome C oxidase assembly protein CtaG/COX11
Genomic Order:  2195 Name:  ? Medtr3g053650
Secondary Identifier:  ? PAC:31060736
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g053650 0.5kb upstream 0.5kb upstream 5238 true chr3: 21331614-21336851 Medicago truncatula
Medtr3g053650 0.5kb upstream 0.5kb upstream 500 false chr3: 21336352-21336851 Medicago truncatula
Medtr3g053650 0.5kb downstream 0.5kb downstream 5238 true chr3: 21331114-21336351 Medicago truncatula
Medtr3g053650 0.5kb downstream 0.5kb downstream 500 false chr3: 21331114-21331613 Medicago truncatula
Medtr3g053650 1.0kb upstream 1.0kb upstream 5738 true chr3: 21331614-21337351 Medicago truncatula
Medtr3g053650 1.0kb upstream 1.0kb upstream 1000 false chr3: 21336352-21337351 Medicago truncatula
Medtr3g053650 1.0kb downstream 1.0kb downstream 5738 true chr3: 21330614-21336351 Medicago truncatula
Medtr3g053650 1.0kb downstream 1.0kb downstream 1000 false chr3: 21330614-21331613 Medicago truncatula
Medtr3g053650 2.0kb upstream 2.0kb upstream 6738 true chr3: 21331614-21338351 Medicago truncatula
Medtr3g053650 2.0kb upstream 2.0kb upstream 2000 false chr3: 21336352-21338351 Medicago truncatula
Medtr3g053650 2.0kb downstream 2.0kb downstream 6738 true chr3: 21329614-21336351 Medicago truncatula
Medtr3g053650 2.0kb downstream 2.0kb downstream 2000 false chr3: 21329614-21331613 Medicago truncatula
Medtr3g053650 5.0kb upstream 5.0kb upstream 9738 true chr3: 21331614-21341351 Medicago truncatula
Medtr3g053650 5.0kb upstream 5.0kb upstream 5000 false chr3: 21336352-21341351 Medicago truncatula
Medtr3g053650 5.0kb downstream 5.0kb downstream 9738 true chr3: 21326614-21336351 Medicago truncatula
Medtr3g053650 5.0kb downstream 5.0kb downstream 5000 false chr3: 21326614-21331613 Medicago truncatula
Medtr3g053650 10.0kb upstream 10.0kb upstream 14738 true chr3: 21331614-21346351 Medicago truncatula
Medtr3g053650 10.0kb upstream 10.0kb upstream 10000 false chr3: 21336352-21346351 Medicago truncatula
Medtr3g053650 10.0kb downstream 10.0kb downstream 14738 true chr3: 21321614-21336351 Medicago truncatula
Medtr3g053650 10.0kb downstream 10.0kb downstream 10000 false chr3: 21321614-21331613 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305855 5265 Fabidae View MSA
124061652 5270 Rosid View MSA
123747181 5271 Pentapetalae View MSA
122787948 5272 Eudicot View MSA
122044344 5273 Angiosperm View MSA
121347524 5274 Embryophyte View MSA
123425070 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.942        
cufflinks 1.358        
cufflinks 1.182        
cufflinks 0.447       Low
cufflinks 1.644       High
cufflinks 0.465       Low
cufflinks 0.899        
cufflinks 1.035        
cufflinks 0.88        

0 Strain