Gene : Medtr3g088555 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR30612:SF5 - PROTEIN TRANSLOCASE SUBUNIT SECA2, CHLOROPLASTIC Description:  preprotein translocase subunit SecA
Genomic Order:  4699 Name:  ? Medtr3g088555
Secondary Identifier:  ? PAC:31057034
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g088555 0.5kb upstream 0.5kb upstream 17433 true chr3: 40256845-40274277 Medicago truncatula
Medtr3g088555 0.5kb upstream 0.5kb upstream 500 false chr3: 40256845-40257344 Medicago truncatula
Medtr3g088555 0.5kb downstream 0.5kb downstream 17433 true chr3: 40257345-40274777 Medicago truncatula
Medtr3g088555 0.5kb downstream 0.5kb downstream 500 false chr3: 40274278-40274777 Medicago truncatula
Medtr3g088555 1.0kb upstream 1.0kb upstream 17933 true chr3: 40256345-40274277 Medicago truncatula
Medtr3g088555 1.0kb upstream 1.0kb upstream 1000 false chr3: 40256345-40257344 Medicago truncatula
Medtr3g088555 1.0kb downstream 1.0kb downstream 17933 true chr3: 40257345-40275277 Medicago truncatula
Medtr3g088555 1.0kb downstream 1.0kb downstream 1000 false chr3: 40274278-40275277 Medicago truncatula
Medtr3g088555 2.0kb upstream 2.0kb upstream 18933 true chr3: 40255345-40274277 Medicago truncatula
Medtr3g088555 2.0kb upstream 2.0kb upstream 2000 false chr3: 40255345-40257344 Medicago truncatula
Medtr3g088555 2.0kb downstream 2.0kb downstream 18933 true chr3: 40257345-40276277 Medicago truncatula
Medtr3g088555 2.0kb downstream 2.0kb downstream 2000 false chr3: 40274278-40276277 Medicago truncatula
Medtr3g088555 5.0kb upstream 5.0kb upstream 21933 true chr3: 40252345-40274277 Medicago truncatula
Medtr3g088555 5.0kb upstream 5.0kb upstream 5000 false chr3: 40252345-40257344 Medicago truncatula
Medtr3g088555 5.0kb downstream 5.0kb downstream 21933 true chr3: 40257345-40279277 Medicago truncatula
Medtr3g088555 5.0kb downstream 5.0kb downstream 5000 false chr3: 40274278-40279277 Medicago truncatula
Medtr3g088555 10.0kb upstream 10.0kb upstream 26933 true chr3: 40247345-40274277 Medicago truncatula
Medtr3g088555 10.0kb upstream 10.0kb upstream 10000 false chr3: 40247345-40257344 Medicago truncatula
Medtr3g088555 10.0kb downstream 10.0kb downstream 26933 true chr3: 40257345-40284277 Medicago truncatula
Medtr3g088555 10.0kb downstream 10.0kb downstream 10000 false chr3: 40274278-40284277 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299884 5265 Fabidae View MSA
124067492 5270 Rosid View MSA
123740591 5271 Pentapetalae View MSA
122790576 5272 Eudicot View MSA
122047276 5273 Angiosperm View MSA
121346470 5274 Embryophyte View MSA
123428614 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.158        
cufflinks 0.159        
cufflinks 0.251        
cufflinks 0.057     Low Low
cufflinks 0.384       High
cufflinks 0.057     Low Low
cufflinks 0.125        
cufflinks 0.218        
cufflinks 0.071     Low  

0 Strain