Gene : Medtr3g055330 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13844//PTHR13844:SF14 - BRG-1 ASSOCIATED FACTOR 60 BAF60 Description:  SWIB/MDM2 domain protein
Genomic Order:  2250 Name:  ? Medtr3g055330
Secondary Identifier:  ? PAC:31054162
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g055330 0.5kb upstream 0.5kb upstream 3985 true chr3: 21752570-21756554 Medicago truncatula
Medtr3g055330 0.5kb upstream 0.5kb upstream 500 false chr3: 21756055-21756554 Medicago truncatula
Medtr3g055330 0.5kb downstream 0.5kb downstream 3985 true chr3: 21752070-21756054 Medicago truncatula
Medtr3g055330 0.5kb downstream 0.5kb downstream 500 false chr3: 21752070-21752569 Medicago truncatula
Medtr3g055330 1.0kb upstream 1.0kb upstream 4485 true chr3: 21752570-21757054 Medicago truncatula
Medtr3g055330 1.0kb upstream 1.0kb upstream 1000 false chr3: 21756055-21757054 Medicago truncatula
Medtr3g055330 1.0kb downstream 1.0kb downstream 4485 true chr3: 21751570-21756054 Medicago truncatula
Medtr3g055330 1.0kb downstream 1.0kb downstream 1000 false chr3: 21751570-21752569 Medicago truncatula
Medtr3g055330 2.0kb upstream 2.0kb upstream 5485 true chr3: 21752570-21758054 Medicago truncatula
Medtr3g055330 2.0kb upstream 2.0kb upstream 2000 false chr3: 21756055-21758054 Medicago truncatula
Medtr3g055330 2.0kb downstream 2.0kb downstream 5485 true chr3: 21750570-21756054 Medicago truncatula
Medtr3g055330 2.0kb downstream 2.0kb downstream 2000 false chr3: 21750570-21752569 Medicago truncatula
Medtr3g055330 5.0kb upstream 5.0kb upstream 8485 true chr3: 21752570-21761054 Medicago truncatula
Medtr3g055330 5.0kb upstream 5.0kb upstream 5000 false chr3: 21756055-21761054 Medicago truncatula
Medtr3g055330 5.0kb downstream 5.0kb downstream 8485 true chr3: 21747570-21756054 Medicago truncatula
Medtr3g055330 5.0kb downstream 5.0kb downstream 5000 false chr3: 21747570-21752569 Medicago truncatula
Medtr3g055330 10.0kb upstream 10.0kb upstream 13485 true chr3: 21752570-21766054 Medicago truncatula
Medtr3g055330 10.0kb upstream 10.0kb upstream 10000 false chr3: 21756055-21766054 Medicago truncatula
Medtr3g055330 10.0kb downstream 10.0kb downstream 13485 true chr3: 21742570-21756054 Medicago truncatula
Medtr3g055330 10.0kb downstream 10.0kb downstream 10000 false chr3: 21742570-21752569 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302775 5265 Fabidae View MSA
124069703 5270 Rosid View MSA
123745418 5271 Pentapetalae View MSA
122789577 5272 Eudicot View MSA
122051489 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121346122 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.759       High
cufflinks 0.611        
cufflinks 0.505        
cufflinks 0.223       Low
cufflinks 0.669        
cufflinks 0.515        
cufflinks 0.578        
cufflinks 0.483        
cufflinks 0.353        

0 Strain