Gene : Medtr3g029590 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Description:  ARM repeat CCCH-type zinc finger protein
Genomic Order:  1100 Name:  ? Medtr3g029590
Secondary Identifier:  ? PAC:31055407
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g029590 0.5kb upstream 0.5kb upstream 4956 true chr3: 9312889-9317844 Medicago truncatula
Medtr3g029590 0.5kb upstream 0.5kb upstream 500 false chr3: 9317345-9317844 Medicago truncatula
Medtr3g029590 0.5kb downstream 0.5kb downstream 4956 true chr3: 9312389-9317344 Medicago truncatula
Medtr3g029590 0.5kb downstream 0.5kb downstream 500 false chr3: 9312389-9312888 Medicago truncatula
Medtr3g029590 1.0kb upstream 1.0kb upstream 5456 true chr3: 9312889-9318344 Medicago truncatula
Medtr3g029590 1.0kb upstream 1.0kb upstream 1000 false chr3: 9317345-9318344 Medicago truncatula
Medtr3g029590 1.0kb downstream 1.0kb downstream 5456 true chr3: 9311889-9317344 Medicago truncatula
Medtr3g029590 1.0kb downstream 1.0kb downstream 1000 false chr3: 9311889-9312888 Medicago truncatula
Medtr3g029590 2.0kb upstream 2.0kb upstream 6456 true chr3: 9312889-9319344 Medicago truncatula
Medtr3g029590 2.0kb upstream 2.0kb upstream 2000 false chr3: 9317345-9319344 Medicago truncatula
Medtr3g029590 2.0kb downstream 2.0kb downstream 6456 true chr3: 9310889-9317344 Medicago truncatula
Medtr3g029590 2.0kb downstream 2.0kb downstream 2000 false chr3: 9310889-9312888 Medicago truncatula
Medtr3g029590 5.0kb upstream 5.0kb upstream 9456 true chr3: 9312889-9322344 Medicago truncatula
Medtr3g029590 5.0kb upstream 5.0kb upstream 5000 false chr3: 9317345-9322344 Medicago truncatula
Medtr3g029590 5.0kb downstream 5.0kb downstream 9456 true chr3: 9307889-9317344 Medicago truncatula
Medtr3g029590 5.0kb downstream 5.0kb downstream 5000 false chr3: 9307889-9312888 Medicago truncatula
Medtr3g029590 10.0kb upstream 10.0kb upstream 14456 true chr3: 9312889-9327344 Medicago truncatula
Medtr3g029590 10.0kb upstream 10.0kb upstream 10000 false chr3: 9317345-9327344 Medicago truncatula
Medtr3g029590 10.0kb downstream 10.0kb downstream 14456 true chr3: 9302889-9317344 Medicago truncatula
Medtr3g029590 10.0kb downstream 10.0kb downstream 10000 false chr3: 9302889-9312888 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314270 5265 Fabidae View MSA
124070984 5270 Rosid View MSA
123746400 5271 Pentapetalae View MSA
122787606 5272 Eudicot View MSA
122046013 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.822       Low
cufflinks 14.094     High High
cufflinks 12.292     High  
cufflinks 9.724     High  
cufflinks 15.421     High High
cufflinks 5.768       Low
cufflinks 6.366       Low
cufflinks 9.304     High  
cufflinks 10.585     High  

0 Strain