Gene : Medtr3g040400 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR11875:SF60 - NAP1-RELATED PROTEIN 1-RELATED Description:  nucleosome/chromatin assembly factor group protein
Genomic Order:  1596 Name:  ? Medtr3g040400
Secondary Identifier:  ? PAC:31060812
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g040400 0.5kb upstream 0.5kb upstream 5505 true chr3: 14195667-14201171 Medicago truncatula
Medtr3g040400 0.5kb upstream 0.5kb upstream 500 false chr3: 14195667-14196166 Medicago truncatula
Medtr3g040400 0.5kb downstream 0.5kb downstream 5505 true chr3: 14196167-14201671 Medicago truncatula
Medtr3g040400 0.5kb downstream 0.5kb downstream 500 false chr3: 14201172-14201671 Medicago truncatula
Medtr3g040400 1.0kb upstream 1.0kb upstream 6005 true chr3: 14195167-14201171 Medicago truncatula
Medtr3g040400 1.0kb upstream 1.0kb upstream 1000 false chr3: 14195167-14196166 Medicago truncatula
Medtr3g040400 1.0kb downstream 1.0kb downstream 6005 true chr3: 14196167-14202171 Medicago truncatula
Medtr3g040400 1.0kb downstream 1.0kb downstream 1000 false chr3: 14201172-14202171 Medicago truncatula
Medtr3g040400 2.0kb upstream 2.0kb upstream 7005 true chr3: 14194167-14201171 Medicago truncatula
Medtr3g040400 2.0kb upstream 2.0kb upstream 2000 false chr3: 14194167-14196166 Medicago truncatula
Medtr3g040400 2.0kb downstream 2.0kb downstream 7005 true chr3: 14196167-14203171 Medicago truncatula
Medtr3g040400 2.0kb downstream 2.0kb downstream 2000 false chr3: 14201172-14203171 Medicago truncatula
Medtr3g040400 5.0kb upstream 5.0kb upstream 10005 true chr3: 14191167-14201171 Medicago truncatula
Medtr3g040400 5.0kb upstream 5.0kb upstream 5000 false chr3: 14191167-14196166 Medicago truncatula
Medtr3g040400 5.0kb downstream 5.0kb downstream 10005 true chr3: 14196167-14206171 Medicago truncatula
Medtr3g040400 5.0kb downstream 5.0kb downstream 5000 false chr3: 14201172-14206171 Medicago truncatula
Medtr3g040400 10.0kb upstream 10.0kb upstream 15005 true chr3: 14186167-14201171 Medicago truncatula
Medtr3g040400 10.0kb upstream 10.0kb upstream 10000 false chr3: 14186167-14196166 Medicago truncatula
Medtr3g040400 10.0kb downstream 10.0kb downstream 15005 true chr3: 14196167-14211171 Medicago truncatula
Medtr3g040400 10.0kb downstream 10.0kb downstream 10000 false chr3: 14201172-14211171 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307535 5265 Fabidae View MSA
124073119 5270 Rosid View MSA
123751340 5271 Pentapetalae View MSA
122794280 5272 Eudicot View MSA
122049668 5273 Angiosperm View MSA
121348262 5274 Embryophyte View MSA
123426622 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.447        
cufflinks 5.865        
cufflinks 6.65        
cufflinks 2.569        
cufflinks 15.35     High High
cufflinks 0.982       Low
cufflinks 3.353        
cufflinks 6.943        
cufflinks 3.152        

0 Strain