Gene : Medtr3g025250 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR24298:SF104 - FLAVONOID 3'-MONOOXYGENASE Description:  flavonoid hydroxylase
Genomic Order:  915 Name:  ? Medtr3g025250
Secondary Identifier:  ? PAC:31053961
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY1F-823 Medicago truncatula pathologic  
Mtruncatula PWY-3101 Medicago truncatula pathologic  
Mtruncatula PWY-5060 Medicago truncatula pathologic  
Mtruncatula PWY-5152 Medicago truncatula pathologic  
Mtruncatula PWY-5391 Medicago truncatula pathologic  

Genomics

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g025250 0.5kb upstream 0.5kb upstream 2814 true chr3: 7667051-7669864 Medicago truncatula
Medtr3g025250 0.5kb upstream 0.5kb upstream 500 false chr3: 7667051-7667550 Medicago truncatula
Medtr3g025250 0.5kb downstream 0.5kb downstream 2814 true chr3: 7667551-7670364 Medicago truncatula
Medtr3g025250 0.5kb downstream 0.5kb downstream 500 false chr3: 7669865-7670364 Medicago truncatula
Medtr3g025250 1.0kb upstream 1.0kb upstream 3314 true chr3: 7666551-7669864 Medicago truncatula
Medtr3g025250 1.0kb upstream 1.0kb upstream 1000 false chr3: 7666551-7667550 Medicago truncatula
Medtr3g025250 1.0kb downstream 1.0kb downstream 3314 true chr3: 7667551-7670864 Medicago truncatula
Medtr3g025250 1.0kb downstream 1.0kb downstream 1000 false chr3: 7669865-7670864 Medicago truncatula
Medtr3g025250 2.0kb upstream 2.0kb upstream 4314 true chr3: 7665551-7669864 Medicago truncatula
Medtr3g025250 2.0kb upstream 2.0kb upstream 2000 false chr3: 7665551-7667550 Medicago truncatula
Medtr3g025250 2.0kb downstream 2.0kb downstream 4314 true chr3: 7667551-7671864 Medicago truncatula
Medtr3g025250 2.0kb downstream 2.0kb downstream 2000 false chr3: 7669865-7671864 Medicago truncatula
Medtr3g025250 5.0kb upstream 5.0kb upstream 7314 true chr3: 7662551-7669864 Medicago truncatula
Medtr3g025250 5.0kb upstream 5.0kb upstream 5000 false chr3: 7662551-7667550 Medicago truncatula
Medtr3g025250 5.0kb downstream 5.0kb downstream 7314 true chr3: 7667551-7674864 Medicago truncatula
Medtr3g025250 5.0kb downstream 5.0kb downstream 5000 false chr3: 7669865-7674864 Medicago truncatula
Medtr3g025250 10.0kb upstream 10.0kb upstream 12314 true chr3: 7657551-7669864 Medicago truncatula
Medtr3g025250 10.0kb upstream 10.0kb upstream 10000 false chr3: 7657551-7667550 Medicago truncatula
Medtr3g025250 10.0kb downstream 10.0kb downstream 12314 true chr3: 7667551-7679864 Medicago truncatula
Medtr3g025250 10.0kb downstream 10.0kb downstream 10000 false chr3: 7669865-7679864 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315326 5265 Fabidae View MSA
124074733 5270 Rosid View MSA
123753669 5271 Pentapetalae View MSA
122797866 5272 Eudicot View MSA
122051653 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121351760 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain