Gene : Medtr3g007480 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11527//PTHR11527:SF131 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY Description:  transmembrane protein, putative
Genomic Order:  139 Name:  ? Medtr3g007480
Secondary Identifier:  ? PAC:31057676
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g007480 0.5kb upstream 0.5kb upstream 2616 true chr3: 1036756-1039371 Medicago truncatula
Medtr3g007480 0.5kb upstream 0.5kb upstream 500 false chr3: 1038872-1039371 Medicago truncatula
Medtr3g007480 0.5kb downstream 0.5kb downstream 2616 true chr3: 1036256-1038871 Medicago truncatula
Medtr3g007480 0.5kb downstream 0.5kb downstream 500 false chr3: 1036256-1036755 Medicago truncatula
Medtr3g007480 1.0kb upstream 1.0kb upstream 3116 true chr3: 1036756-1039871 Medicago truncatula
Medtr3g007480 1.0kb upstream 1.0kb upstream 1000 false chr3: 1038872-1039871 Medicago truncatula
Medtr3g007480 1.0kb downstream 1.0kb downstream 3116 true chr3: 1035756-1038871 Medicago truncatula
Medtr3g007480 1.0kb downstream 1.0kb downstream 1000 false chr3: 1035756-1036755 Medicago truncatula
Medtr3g007480 2.0kb upstream 2.0kb upstream 4116 true chr3: 1036756-1040871 Medicago truncatula
Medtr3g007480 2.0kb upstream 2.0kb upstream 2000 false chr3: 1038872-1040871 Medicago truncatula
Medtr3g007480 2.0kb downstream 2.0kb downstream 4116 true chr3: 1034756-1038871 Medicago truncatula
Medtr3g007480 2.0kb downstream 2.0kb downstream 2000 false chr3: 1034756-1036755 Medicago truncatula
Medtr3g007480 5.0kb upstream 5.0kb upstream 7116 true chr3: 1036756-1043871 Medicago truncatula
Medtr3g007480 5.0kb upstream 5.0kb upstream 5000 false chr3: 1038872-1043871 Medicago truncatula
Medtr3g007480 5.0kb downstream 5.0kb downstream 7116 true chr3: 1031756-1038871 Medicago truncatula
Medtr3g007480 5.0kb downstream 5.0kb downstream 5000 false chr3: 1031756-1036755 Medicago truncatula
Medtr3g007480 10.0kb upstream 10.0kb upstream 12116 true chr3: 1036756-1048871 Medicago truncatula
Medtr3g007480 10.0kb upstream 10.0kb upstream 10000 false chr3: 1038872-1048871 Medicago truncatula
Medtr3g007480 10.0kb downstream 10.0kb downstream 12116 true chr3: 1026756-1038871 Medicago truncatula
Medtr3g007480 10.0kb downstream 10.0kb downstream 10000 false chr3: 1026756-1036755 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297682 5265 Fabidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.22       Low
cufflinks 1.661        
cufflinks 1.342        
cufflinks 0.823        
cufflinks 2.115        
cufflinks 3.635       High
cufflinks 1.801        
cufflinks 1.414        
cufflinks 0.957        

0 Strain