Gene : Medtr3g008540 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33359:SF1 - MOLYBDOPTERIN SYNTHASE SULFUR CARRIER SUBUNIT Description:  molybdopterin synthase sulfur carrier subunit
Genomic Order:  216 Name:  ? Medtr3g008540
Secondary Identifier:  ? PAC:31055028
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6823 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g008540 0.5kb upstream 0.5kb upstream 2491 true chr3: 1577393-1579883 Medicago truncatula
Medtr3g008540 0.5kb upstream 0.5kb upstream 500 false chr3: 1577393-1577892 Medicago truncatula
Medtr3g008540 0.5kb downstream 0.5kb downstream 2491 true chr3: 1577893-1580383 Medicago truncatula
Medtr3g008540 0.5kb downstream 0.5kb downstream 500 false chr3: 1579884-1580383 Medicago truncatula
Medtr3g008540 1.0kb upstream 1.0kb upstream 2991 true chr3: 1576893-1579883 Medicago truncatula
Medtr3g008540 1.0kb upstream 1.0kb upstream 1000 false chr3: 1576893-1577892 Medicago truncatula
Medtr3g008540 1.0kb downstream 1.0kb downstream 2991 true chr3: 1577893-1580883 Medicago truncatula
Medtr3g008540 1.0kb downstream 1.0kb downstream 1000 false chr3: 1579884-1580883 Medicago truncatula
Medtr3g008540 2.0kb upstream 2.0kb upstream 3991 true chr3: 1575893-1579883 Medicago truncatula
Medtr3g008540 2.0kb upstream 2.0kb upstream 2000 false chr3: 1575893-1577892 Medicago truncatula
Medtr3g008540 2.0kb downstream 2.0kb downstream 3991 true chr3: 1577893-1581883 Medicago truncatula
Medtr3g008540 2.0kb downstream 2.0kb downstream 2000 false chr3: 1579884-1581883 Medicago truncatula
Medtr3g008540 5.0kb upstream 5.0kb upstream 6991 true chr3: 1572893-1579883 Medicago truncatula
Medtr3g008540 5.0kb upstream 5.0kb upstream 5000 false chr3: 1572893-1577892 Medicago truncatula
Medtr3g008540 5.0kb downstream 5.0kb downstream 6991 true chr3: 1577893-1584883 Medicago truncatula
Medtr3g008540 5.0kb downstream 5.0kb downstream 5000 false chr3: 1579884-1584883 Medicago truncatula
Medtr3g008540 10.0kb upstream 10.0kb upstream 11991 true chr3: 1567893-1579883 Medicago truncatula
Medtr3g008540 10.0kb upstream 10.0kb upstream 10000 false chr3: 1567893-1577892 Medicago truncatula
Medtr3g008540 10.0kb downstream 10.0kb downstream 11991 true chr3: 1577893-1589883 Medicago truncatula
Medtr3g008540 10.0kb downstream 10.0kb downstream 10000 false chr3: 1579884-1589883 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041430 5273 Angiosperm View MSA
122303433 5265 Fabidae View MSA
124072886 5270 Rosid View MSA
123738759 5271 Pentapetalae View MSA
122788962 5272 Eudicot View MSA
121347123 5274 Embryophyte View MSA
123425725 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.621        
cufflinks 2.266        
cufflinks 2.862        
cufflinks 2.067        
cufflinks 2.183        
cufflinks 2.14        
cufflinks 3.773       High
cufflinks 2.037        
cufflinks 2.575        

0 Strain