Gene : Medtr3g009270 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10540:SF8 - COP9 SIGNALOSOME COMPLEX SUBUNIT 6 Description:  COP9 signalosome complex subunit 6a
Genomic Order:  250 Name:  ? Medtr3g009270
Secondary Identifier:  ? PAC:31059572
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g009270 0.5kb upstream 0.5kb upstream 9149 true chr3: 1909047-1918195 Medicago truncatula
Medtr3g009270 0.5kb upstream 0.5kb upstream 500 false chr3: 1917696-1918195 Medicago truncatula
Medtr3g009270 0.5kb downstream 0.5kb downstream 9149 true chr3: 1908547-1917695 Medicago truncatula
Medtr3g009270 0.5kb downstream 0.5kb downstream 500 false chr3: 1908547-1909046 Medicago truncatula
Medtr3g009270 1.0kb upstream 1.0kb upstream 9649 true chr3: 1909047-1918695 Medicago truncatula
Medtr3g009270 1.0kb upstream 1.0kb upstream 1000 false chr3: 1917696-1918695 Medicago truncatula
Medtr3g009270 1.0kb downstream 1.0kb downstream 9649 true chr3: 1908047-1917695 Medicago truncatula
Medtr3g009270 1.0kb downstream 1.0kb downstream 1000 false chr3: 1908047-1909046 Medicago truncatula
Medtr3g009270 2.0kb upstream 2.0kb upstream 10649 true chr3: 1909047-1919695 Medicago truncatula
Medtr3g009270 2.0kb upstream 2.0kb upstream 2000 false chr3: 1917696-1919695 Medicago truncatula
Medtr3g009270 2.0kb downstream 2.0kb downstream 10649 true chr3: 1907047-1917695 Medicago truncatula
Medtr3g009270 2.0kb downstream 2.0kb downstream 2000 false chr3: 1907047-1909046 Medicago truncatula
Medtr3g009270 5.0kb upstream 5.0kb upstream 13649 true chr3: 1909047-1922695 Medicago truncatula
Medtr3g009270 5.0kb upstream 5.0kb upstream 5000 false chr3: 1917696-1922695 Medicago truncatula
Medtr3g009270 5.0kb downstream 5.0kb downstream 13649 true chr3: 1904047-1917695 Medicago truncatula
Medtr3g009270 5.0kb downstream 5.0kb downstream 5000 false chr3: 1904047-1909046 Medicago truncatula
Medtr3g009270 10.0kb upstream 10.0kb upstream 18649 true chr3: 1909047-1927695 Medicago truncatula
Medtr3g009270 10.0kb upstream 10.0kb upstream 10000 false chr3: 1917696-1927695 Medicago truncatula
Medtr3g009270 10.0kb downstream 10.0kb downstream 18649 true chr3: 1899047-1917695 Medicago truncatula
Medtr3g009270 10.0kb downstream 10.0kb downstream 10000 false chr3: 1899047-1909046 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302157 5265 Fabidae View MSA
124066066 5270 Rosid View MSA
123746091 5271 Pentapetalae View MSA
122792490 5272 Eudicot View MSA
122050330 5273 Angiosperm View MSA
121345331 5274 Embryophyte View MSA
123424156 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.308        
cufflinks 1.32        
cufflinks 1.059        
cufflinks 1.936       High
cufflinks 1.457        
cufflinks 0.984       Low
cufflinks 1.121        
cufflinks 1.142        
cufflinks 2.035       High

0 Strain