Gene : Medtr3g009030 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR10551//PTHR10551:SF13 - FASCIN Description:  glycoside hydrolase family 5 protein
Genomic Order:  237 Name:  ? Medtr3g009030
Secondary Identifier:  ? PAC:31056057
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g009030 0.5kb upstream 0.5kb upstream 7266 true chr3: 1753150-1760415 Medicago truncatula
Medtr3g009030 0.5kb upstream 0.5kb upstream 500 false chr3: 1759916-1760415 Medicago truncatula
Medtr3g009030 0.5kb downstream 0.5kb downstream 7266 true chr3: 1752650-1759915 Medicago truncatula
Medtr3g009030 0.5kb downstream 0.5kb downstream 500 false chr3: 1752650-1753149 Medicago truncatula
Medtr3g009030 1.0kb upstream 1.0kb upstream 7766 true chr3: 1753150-1760915 Medicago truncatula
Medtr3g009030 1.0kb upstream 1.0kb upstream 1000 false chr3: 1759916-1760915 Medicago truncatula
Medtr3g009030 1.0kb downstream 1.0kb downstream 7766 true chr3: 1752150-1759915 Medicago truncatula
Medtr3g009030 1.0kb downstream 1.0kb downstream 1000 false chr3: 1752150-1753149 Medicago truncatula
Medtr3g009030 2.0kb upstream 2.0kb upstream 8766 true chr3: 1753150-1761915 Medicago truncatula
Medtr3g009030 2.0kb upstream 2.0kb upstream 2000 false chr3: 1759916-1761915 Medicago truncatula
Medtr3g009030 2.0kb downstream 2.0kb downstream 8766 true chr3: 1751150-1759915 Medicago truncatula
Medtr3g009030 2.0kb downstream 2.0kb downstream 2000 false chr3: 1751150-1753149 Medicago truncatula
Medtr3g009030 5.0kb upstream 5.0kb upstream 11766 true chr3: 1753150-1764915 Medicago truncatula
Medtr3g009030 5.0kb upstream 5.0kb upstream 5000 false chr3: 1759916-1764915 Medicago truncatula
Medtr3g009030 5.0kb downstream 5.0kb downstream 11766 true chr3: 1748150-1759915 Medicago truncatula
Medtr3g009030 5.0kb downstream 5.0kb downstream 5000 false chr3: 1748150-1753149 Medicago truncatula
Medtr3g009030 10.0kb upstream 10.0kb upstream 16766 true chr3: 1753150-1769915 Medicago truncatula
Medtr3g009030 10.0kb upstream 10.0kb upstream 10000 false chr3: 1759916-1769915 Medicago truncatula
Medtr3g009030 10.0kb downstream 10.0kb downstream 16766 true chr3: 1743150-1759915 Medicago truncatula
Medtr3g009030 10.0kb downstream 10.0kb downstream 10000 false chr3: 1743150-1753149 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313433 5265 Fabidae View MSA
124070042 5270 Rosid View MSA
123746465 5271 Pentapetalae View MSA
122796777 5272 Eudicot View MSA
122048839 5273 Angiosperm View MSA
121348630 5274 Embryophyte View MSA
123380948 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.039     Low Low
cufflinks 11.715     High  
cufflinks 12.206     High  
cufflinks 0.021     Low Low
cufflinks 9.415        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.099        
cufflinks 9.043     High  
cufflinks 0.081     Low  

0 Strain