Gene : Medtr3g010320 M. truncatula Mt4.0v1
Description:  zinc finger SWIM domain protein Genomic Order:  305
Name:  ? Medtr3g010320 Secondary Identifier:  ? PAC:31057711
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g010320 0.5kb upstream 0.5kb upstream 1892 true chr3: 2408774-2410665 Medicago truncatula
Medtr3g010320 0.5kb upstream 0.5kb upstream 500 false chr3: 2408774-2409273 Medicago truncatula
Medtr3g010320 0.5kb downstream 0.5kb downstream 1892 true chr3: 2409274-2411165 Medicago truncatula
Medtr3g010320 0.5kb downstream 0.5kb downstream 500 false chr3: 2410666-2411165 Medicago truncatula
Medtr3g010320 1.0kb upstream 1.0kb upstream 2392 true chr3: 2408274-2410665 Medicago truncatula
Medtr3g010320 1.0kb upstream 1.0kb upstream 1000 false chr3: 2408274-2409273 Medicago truncatula
Medtr3g010320 1.0kb downstream 1.0kb downstream 2392 true chr3: 2409274-2411665 Medicago truncatula
Medtr3g010320 1.0kb downstream 1.0kb downstream 1000 false chr3: 2410666-2411665 Medicago truncatula
Medtr3g010320 2.0kb upstream 2.0kb upstream 3392 true chr3: 2407274-2410665 Medicago truncatula
Medtr3g010320 2.0kb upstream 2.0kb upstream 2000 false chr3: 2407274-2409273 Medicago truncatula
Medtr3g010320 2.0kb downstream 2.0kb downstream 3392 true chr3: 2409274-2412665 Medicago truncatula
Medtr3g010320 2.0kb downstream 2.0kb downstream 2000 false chr3: 2410666-2412665 Medicago truncatula
Medtr3g010320 5.0kb upstream 5.0kb upstream 6392 true chr3: 2404274-2410665 Medicago truncatula
Medtr3g010320 5.0kb upstream 5.0kb upstream 5000 false chr3: 2404274-2409273 Medicago truncatula
Medtr3g010320 5.0kb downstream 5.0kb downstream 6392 true chr3: 2409274-2415665 Medicago truncatula
Medtr3g010320 5.0kb downstream 5.0kb downstream 5000 false chr3: 2410666-2415665 Medicago truncatula
Medtr3g010320 10.0kb upstream 10.0kb upstream 11392 true chr3: 2399274-2410665 Medicago truncatula
Medtr3g010320 10.0kb upstream 10.0kb upstream 10000 false chr3: 2399274-2409273 Medicago truncatula
Medtr3g010320 10.0kb downstream 10.0kb downstream 11392 true chr3: 2409274-2420665 Medicago truncatula
Medtr3g010320 10.0kb downstream 10.0kb downstream 10000 false chr3: 2410666-2420665 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028150 5273 Angiosperm View MSA
122790104 5272 Eudicot View MSA
122260248 5265 Fabidae Singleton cluster - no MSA
124064735 5270 Rosid View MSA
123736705 5271 Pentapetalae View MSA
121344480 5274 Embryophyte View MSA
123428462 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.843       High
cufflinks 0.751       Low
cufflinks 0.901        
cufflinks 1.132        
cufflinks 1.593        
cufflinks 2.96       High
cufflinks 2.335        
cufflinks 0.832       Low
cufflinks 1.291        

0 Strain