Gene : Medtr3g010010 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN Description:  transducin/WD40 repeat protein
Genomic Order:  285 Name:  ? Medtr3g010010
Secondary Identifier:  ? PAC:31057959
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g010010 0.5kb upstream 0.5kb upstream 7603 true chr3: 2260075-2267677 Medicago truncatula
Medtr3g010010 0.5kb upstream 0.5kb upstream 500 false chr3: 2267178-2267677 Medicago truncatula
Medtr3g010010 0.5kb downstream 0.5kb downstream 7603 true chr3: 2259575-2267177 Medicago truncatula
Medtr3g010010 0.5kb downstream 0.5kb downstream 500 false chr3: 2259575-2260074 Medicago truncatula
Medtr3g010010 1.0kb upstream 1.0kb upstream 8103 true chr3: 2260075-2268177 Medicago truncatula
Medtr3g010010 1.0kb upstream 1.0kb upstream 1000 false chr3: 2267178-2268177 Medicago truncatula
Medtr3g010010 1.0kb downstream 1.0kb downstream 8103 true chr3: 2259075-2267177 Medicago truncatula
Medtr3g010010 1.0kb downstream 1.0kb downstream 1000 false chr3: 2259075-2260074 Medicago truncatula
Medtr3g010010 2.0kb upstream 2.0kb upstream 9103 true chr3: 2260075-2269177 Medicago truncatula
Medtr3g010010 2.0kb upstream 2.0kb upstream 2000 false chr3: 2267178-2269177 Medicago truncatula
Medtr3g010010 2.0kb downstream 2.0kb downstream 9103 true chr3: 2258075-2267177 Medicago truncatula
Medtr3g010010 2.0kb downstream 2.0kb downstream 2000 false chr3: 2258075-2260074 Medicago truncatula
Medtr3g010010 5.0kb upstream 5.0kb upstream 12103 true chr3: 2260075-2272177 Medicago truncatula
Medtr3g010010 5.0kb upstream 5.0kb upstream 5000 false chr3: 2267178-2272177 Medicago truncatula
Medtr3g010010 5.0kb downstream 5.0kb downstream 12103 true chr3: 2255075-2267177 Medicago truncatula
Medtr3g010010 5.0kb downstream 5.0kb downstream 5000 false chr3: 2255075-2260074 Medicago truncatula
Medtr3g010010 10.0kb upstream 10.0kb upstream 17103 true chr3: 2260075-2277177 Medicago truncatula
Medtr3g010010 10.0kb upstream 10.0kb upstream 10000 false chr3: 2267178-2277177 Medicago truncatula
Medtr3g010010 10.0kb downstream 10.0kb downstream 17103 true chr3: 2250075-2267177 Medicago truncatula
Medtr3g010010 10.0kb downstream 10.0kb downstream 10000 false chr3: 2250075-2260074 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041408 5273 Angiosperm View MSA
122306689 5265 Fabidae View MSA
124065588 5270 Rosid View MSA
123745758 5271 Pentapetalae View MSA
122795577 5272 Eudicot View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.471        
cufflinks 7.234        
cufflinks 7.736        
cufflinks 5.291        
cufflinks 8.631       High
cufflinks 2.808       Low
cufflinks 6.198        
cufflinks 7.517        
cufflinks 6.314        

0 Strain