Gene : Medtr3g012020 M. truncatula Mt4.0v1
Defline:  (1 of 9) PTHR33470:SF4 - ARABINOGALACTAN PROTEIN 31 Description:  pollen Ole e I family allergens
Genomic Order:  420 Name:  ? Medtr3g012020
Secondary Identifier:  ? PAC:31061252
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g012020 0.5kb upstream 0.5kb upstream 1894 true chr3: 3174857-3176750 Medicago truncatula
Medtr3g012020 0.5kb upstream 0.5kb upstream 500 false chr3: 3176251-3176750 Medicago truncatula
Medtr3g012020 0.5kb downstream 0.5kb downstream 1894 true chr3: 3174357-3176250 Medicago truncatula
Medtr3g012020 0.5kb downstream 0.5kb downstream 500 false chr3: 3174357-3174856 Medicago truncatula
Medtr3g012020 1.0kb upstream 1.0kb upstream 2394 true chr3: 3174857-3177250 Medicago truncatula
Medtr3g012020 1.0kb upstream 1.0kb upstream 1000 false chr3: 3176251-3177250 Medicago truncatula
Medtr3g012020 1.0kb downstream 1.0kb downstream 2394 true chr3: 3173857-3176250 Medicago truncatula
Medtr3g012020 1.0kb downstream 1.0kb downstream 1000 false chr3: 3173857-3174856 Medicago truncatula
Medtr3g012020 2.0kb upstream 2.0kb upstream 3394 true chr3: 3174857-3178250 Medicago truncatula
Medtr3g012020 2.0kb upstream 2.0kb upstream 2000 false chr3: 3176251-3178250 Medicago truncatula
Medtr3g012020 2.0kb downstream 2.0kb downstream 3394 true chr3: 3172857-3176250 Medicago truncatula
Medtr3g012020 2.0kb downstream 2.0kb downstream 2000 false chr3: 3172857-3174856 Medicago truncatula
Medtr3g012020 5.0kb upstream 5.0kb upstream 6394 true chr3: 3174857-3181250 Medicago truncatula
Medtr3g012020 5.0kb upstream 5.0kb upstream 5000 false chr3: 3176251-3181250 Medicago truncatula
Medtr3g012020 5.0kb downstream 5.0kb downstream 6394 true chr3: 3169857-3176250 Medicago truncatula
Medtr3g012020 5.0kb downstream 5.0kb downstream 5000 false chr3: 3169857-3174856 Medicago truncatula
Medtr3g012020 10.0kb upstream 10.0kb upstream 11394 true chr3: 3174857-3186250 Medicago truncatula
Medtr3g012020 10.0kb upstream 10.0kb upstream 10000 false chr3: 3176251-3186250 Medicago truncatula
Medtr3g012020 10.0kb downstream 10.0kb downstream 11394 true chr3: 3164857-3176250 Medicago truncatula
Medtr3g012020 10.0kb downstream 10.0kb downstream 10000 false chr3: 3164857-3174856 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315534 5265 Fabidae View MSA
124066868 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain