Gene : Medtr3g013720 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11607//PTHR11607:SF36 - ALPHA-MANNOSIDASE Description:  glycosyl hydrolase family 38 protein
Genomic Order:  476 Name:  ? Medtr3g013720
Secondary Identifier:  ? PAC:31060199
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g013720 0.5kb upstream 0.5kb upstream 788 true chr3: 3737956-3738743 Medicago truncatula
Medtr3g013720 0.5kb upstream 0.5kb upstream 500 false chr3: 3738244-3738743 Medicago truncatula
Medtr3g013720 0.5kb downstream 0.5kb downstream 788 true chr3: 3737456-3738243 Medicago truncatula
Medtr3g013720 0.5kb downstream 0.5kb downstream 500 false chr3: 3737456-3737955 Medicago truncatula
Medtr3g013720 1.0kb upstream 1.0kb upstream 1288 true chr3: 3737956-3739243 Medicago truncatula
Medtr3g013720 1.0kb upstream 1.0kb upstream 1000 false chr3: 3738244-3739243 Medicago truncatula
Medtr3g013720 1.0kb downstream 1.0kb downstream 1288 true chr3: 3736956-3738243 Medicago truncatula
Medtr3g013720 1.0kb downstream 1.0kb downstream 1000 false chr3: 3736956-3737955 Medicago truncatula
Medtr3g013720 2.0kb upstream 2.0kb upstream 2288 true chr3: 3737956-3740243 Medicago truncatula
Medtr3g013720 2.0kb upstream 2.0kb upstream 2000 false chr3: 3738244-3740243 Medicago truncatula
Medtr3g013720 2.0kb downstream 2.0kb downstream 2288 true chr3: 3735956-3738243 Medicago truncatula
Medtr3g013720 2.0kb downstream 2.0kb downstream 2000 false chr3: 3735956-3737955 Medicago truncatula
Medtr3g013720 5.0kb upstream 5.0kb upstream 5288 true chr3: 3737956-3743243 Medicago truncatula
Medtr3g013720 5.0kb upstream 5.0kb upstream 5000 false chr3: 3738244-3743243 Medicago truncatula
Medtr3g013720 5.0kb downstream 5.0kb downstream 5288 true chr3: 3732956-3738243 Medicago truncatula
Medtr3g013720 5.0kb downstream 5.0kb downstream 5000 false chr3: 3732956-3737955 Medicago truncatula
Medtr3g013720 10.0kb upstream 10.0kb upstream 10288 true chr3: 3737956-3748243 Medicago truncatula
Medtr3g013720 10.0kb upstream 10.0kb upstream 10000 false chr3: 3738244-3748243 Medicago truncatula
Medtr3g013720 10.0kb downstream 10.0kb downstream 10288 true chr3: 3727956-3738243 Medicago truncatula
Medtr3g013720 10.0kb downstream 10.0kb downstream 10000 false chr3: 3727956-3737955 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121623117 5273 Angiosperm Singleton cluster - no MSA
122260813 5265 Fabidae Singleton cluster - no MSA
124002172 5270 Rosid Singleton cluster - no MSA
123576358 5271 Pentapetalae Singleton cluster - no MSA
122611070 5272 Eudicot Singleton cluster - no MSA
120895221 5274 Embryophyte Singleton cluster - no MSA
122935876 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.353       Low
cufflinks 2.169        
cufflinks 6.972        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.591        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.125        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain