Gene : Medtr3g078380 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG0265//KOG0313 - U5 snRNP-specific protein-like factor and related proteins // Microtubule binding protein YTM1 (contains WD40 repeats) Description:  myosin heavy chain kinase B-like protein
Genomic Order:  3968 Name:  ? Medtr3g078380
Secondary Identifier:  ? PAC:31059599
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g078380 0.5kb upstream 0.5kb upstream 2300 true chr3: 35311848-35314147 Medicago truncatula
Medtr3g078380 0.5kb upstream 0.5kb upstream 500 false chr3: 35313648-35314147 Medicago truncatula
Medtr3g078380 0.5kb downstream 0.5kb downstream 2300 true chr3: 35311348-35313647 Medicago truncatula
Medtr3g078380 0.5kb downstream 0.5kb downstream 500 false chr3: 35311348-35311847 Medicago truncatula
Medtr3g078380 1.0kb upstream 1.0kb upstream 2800 true chr3: 35311848-35314647 Medicago truncatula
Medtr3g078380 1.0kb upstream 1.0kb upstream 1000 false chr3: 35313648-35314647 Medicago truncatula
Medtr3g078380 1.0kb downstream 1.0kb downstream 2800 true chr3: 35310848-35313647 Medicago truncatula
Medtr3g078380 1.0kb downstream 1.0kb downstream 1000 false chr3: 35310848-35311847 Medicago truncatula
Medtr3g078380 2.0kb upstream 2.0kb upstream 3800 true chr3: 35311848-35315647 Medicago truncatula
Medtr3g078380 2.0kb upstream 2.0kb upstream 2000 false chr3: 35313648-35315647 Medicago truncatula
Medtr3g078380 2.0kb downstream 2.0kb downstream 3800 true chr3: 35309848-35313647 Medicago truncatula
Medtr3g078380 2.0kb downstream 2.0kb downstream 2000 false chr3: 35309848-35311847 Medicago truncatula
Medtr3g078380 5.0kb upstream 5.0kb upstream 6800 true chr3: 35311848-35318647 Medicago truncatula
Medtr3g078380 5.0kb upstream 5.0kb upstream 5000 false chr3: 35313648-35318647 Medicago truncatula
Medtr3g078380 5.0kb downstream 5.0kb downstream 6800 true chr3: 35306848-35313647 Medicago truncatula
Medtr3g078380 5.0kb downstream 5.0kb downstream 5000 false chr3: 35306848-35311847 Medicago truncatula
Medtr3g078380 10.0kb upstream 10.0kb upstream 11800 true chr3: 35311848-35323647 Medicago truncatula
Medtr3g078380 10.0kb upstream 10.0kb upstream 10000 false chr3: 35313648-35323647 Medicago truncatula
Medtr3g078380 10.0kb downstream 10.0kb downstream 11800 true chr3: 35301848-35313647 Medicago truncatula
Medtr3g078380 10.0kb downstream 10.0kb downstream 10000 false chr3: 35301848-35311847 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310465 5265 Fabidae View MSA
124069746 5270 Rosid View MSA
123745612 5271 Pentapetalae View MSA
122796889 5272 Eudicot View MSA
122049013 5273 Angiosperm View MSA
121349705 5274 Embryophyte View MSA
123428719 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.323        
cufflinks 0.177        
cufflinks 0.353        
cufflinks 2.916       High
cufflinks 0.321        
cufflinks 2.725       High
cufflinks 1.976        
cufflinks 0.036     Low Low
cufflinks 2.124        

0 Strain