Gene : Medtr3g079530 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR19288:SF25 - PHOSPHATIDYLGLYCEROPHOSPHATASE GEP4, MITOCHONDRIAL Description:  haloacid dehalogenase superfamily protein
Genomic Order:  4040 Name:  ? Medtr3g079530
Secondary Identifier:  ? PAC:31059661
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY4FS-7 Medicago truncatula pathologic  
Mtruncatula PWY-5269 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g079530 0.5kb upstream 0.5kb upstream 5394 true chr3: 35898649-35904042 Medicago truncatula
Medtr3g079530 0.5kb upstream 0.5kb upstream 500 false chr3: 35903543-35904042 Medicago truncatula
Medtr3g079530 0.5kb downstream 0.5kb downstream 5394 true chr3: 35898149-35903542 Medicago truncatula
Medtr3g079530 0.5kb downstream 0.5kb downstream 500 false chr3: 35898149-35898648 Medicago truncatula
Medtr3g079530 1.0kb upstream 1.0kb upstream 5894 true chr3: 35898649-35904542 Medicago truncatula
Medtr3g079530 1.0kb upstream 1.0kb upstream 1000 false chr3: 35903543-35904542 Medicago truncatula
Medtr3g079530 1.0kb downstream 1.0kb downstream 5894 true chr3: 35897649-35903542 Medicago truncatula
Medtr3g079530 1.0kb downstream 1.0kb downstream 1000 false chr3: 35897649-35898648 Medicago truncatula
Medtr3g079530 2.0kb upstream 2.0kb upstream 6894 true chr3: 35898649-35905542 Medicago truncatula
Medtr3g079530 2.0kb upstream 2.0kb upstream 2000 false chr3: 35903543-35905542 Medicago truncatula
Medtr3g079530 2.0kb downstream 2.0kb downstream 6894 true chr3: 35896649-35903542 Medicago truncatula
Medtr3g079530 2.0kb downstream 2.0kb downstream 2000 false chr3: 35896649-35898648 Medicago truncatula
Medtr3g079530 5.0kb upstream 5.0kb upstream 9894 true chr3: 35898649-35908542 Medicago truncatula
Medtr3g079530 5.0kb upstream 5.0kb upstream 5000 false chr3: 35903543-35908542 Medicago truncatula
Medtr3g079530 5.0kb downstream 5.0kb downstream 9894 true chr3: 35893649-35903542 Medicago truncatula
Medtr3g079530 5.0kb downstream 5.0kb downstream 5000 false chr3: 35893649-35898648 Medicago truncatula
Medtr3g079530 10.0kb upstream 10.0kb upstream 14894 true chr3: 35898649-35913542 Medicago truncatula
Medtr3g079530 10.0kb upstream 10.0kb upstream 10000 false chr3: 35903543-35913542 Medicago truncatula
Medtr3g079530 10.0kb downstream 10.0kb downstream 14894 true chr3: 35888649-35903542 Medicago truncatula
Medtr3g079530 10.0kb downstream 10.0kb downstream 10000 false chr3: 35888649-35898648 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301851 5265 Fabidae View MSA
124061153 5270 Rosid View MSA
123744955 5271 Pentapetalae View MSA
122787883 5272 Eudicot View MSA
122047314 5273 Angiosperm View MSA
121345007 5274 Embryophyte View MSA
123425553 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.978        
cufflinks 4.077        
cufflinks 6.837       High
cufflinks 0.622        
cufflinks 5.781       High
cufflinks 0.665        
cufflinks 0.702        
cufflinks 6.206       High
cufflinks 0.642        

0 Strain