Gene : Medtr3g080180 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10666//PTHR10666:SF159 - UBIQUITIN Description:  ubiquitin family protein
Genomic Order:  4095 Name:  ? Medtr3g080180
Secondary Identifier:  ? PAC:31054774
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g080180 0.5kb upstream 0.5kb upstream 1337 true chr3: 36266820-36268156 Medicago truncatula
Medtr3g080180 0.5kb upstream 0.5kb upstream 500 false chr3: 36267657-36268156 Medicago truncatula
Medtr3g080180 0.5kb downstream 0.5kb downstream 1337 true chr3: 36266320-36267656 Medicago truncatula
Medtr3g080180 0.5kb downstream 0.5kb downstream 500 false chr3: 36266320-36266819 Medicago truncatula
Medtr3g080180 1.0kb upstream 1.0kb upstream 1837 true chr3: 36266820-36268656 Medicago truncatula
Medtr3g080180 1.0kb upstream 1.0kb upstream 1000 false chr3: 36267657-36268656 Medicago truncatula
Medtr3g080180 1.0kb downstream 1.0kb downstream 1837 true chr3: 36265820-36267656 Medicago truncatula
Medtr3g080180 1.0kb downstream 1.0kb downstream 1000 false chr3: 36265820-36266819 Medicago truncatula
Medtr3g080180 2.0kb upstream 2.0kb upstream 2837 true chr3: 36266820-36269656 Medicago truncatula
Medtr3g080180 2.0kb upstream 2.0kb upstream 2000 false chr3: 36267657-36269656 Medicago truncatula
Medtr3g080180 2.0kb downstream 2.0kb downstream 2837 true chr3: 36264820-36267656 Medicago truncatula
Medtr3g080180 2.0kb downstream 2.0kb downstream 2000 false chr3: 36264820-36266819 Medicago truncatula
Medtr3g080180 5.0kb upstream 5.0kb upstream 5837 true chr3: 36266820-36272656 Medicago truncatula
Medtr3g080180 5.0kb upstream 5.0kb upstream 5000 false chr3: 36267657-36272656 Medicago truncatula
Medtr3g080180 5.0kb downstream 5.0kb downstream 5837 true chr3: 36261820-36267656 Medicago truncatula
Medtr3g080180 5.0kb downstream 5.0kb downstream 5000 false chr3: 36261820-36266819 Medicago truncatula
Medtr3g080180 10.0kb upstream 10.0kb upstream 10837 true chr3: 36266820-36277656 Medicago truncatula
Medtr3g080180 10.0kb upstream 10.0kb upstream 10000 false chr3: 36267657-36277656 Medicago truncatula
Medtr3g080180 10.0kb downstream 10.0kb downstream 10837 true chr3: 36256820-36267656 Medicago truncatula
Medtr3g080180 10.0kb downstream 10.0kb downstream 10000 false chr3: 36256820-36266819 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027864 5273 Angiosperm View MSA
122306651 5265 Fabidae View MSA
124070157 5270 Rosid View MSA
123749493 5271 Pentapetalae View MSA
122795019 5272 Eudicot View MSA
121297453 5274 Embryophyte View MSA
123335510 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain