Gene : Medtr3g080940 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR11945//PTHR11945:SF164 - MADS BOX PROTEIN Description:  MADS-box transcription factor family protein
Genomic Order:  4158 Name:  ? Medtr3g080940
Secondary Identifier:  ? PAC:31058495
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g080940 0.5kb upstream 0.5kb upstream 1124 true chr3: 36621964-36623087 Medicago truncatula
Medtr3g080940 0.5kb upstream 0.5kb upstream 500 false chr3: 36622588-36623087 Medicago truncatula
Medtr3g080940 0.5kb downstream 0.5kb downstream 1124 true chr3: 36621464-36622587 Medicago truncatula
Medtr3g080940 0.5kb downstream 0.5kb downstream 500 false chr3: 36621464-36621963 Medicago truncatula
Medtr3g080940 1.0kb upstream 1.0kb upstream 1624 true chr3: 36621964-36623587 Medicago truncatula
Medtr3g080940 1.0kb upstream 1.0kb upstream 1000 false chr3: 36622588-36623587 Medicago truncatula
Medtr3g080940 1.0kb downstream 1.0kb downstream 1624 true chr3: 36620964-36622587 Medicago truncatula
Medtr3g080940 1.0kb downstream 1.0kb downstream 1000 false chr3: 36620964-36621963 Medicago truncatula
Medtr3g080940 2.0kb upstream 2.0kb upstream 2624 true chr3: 36621964-36624587 Medicago truncatula
Medtr3g080940 2.0kb upstream 2.0kb upstream 2000 false chr3: 36622588-36624587 Medicago truncatula
Medtr3g080940 2.0kb downstream 2.0kb downstream 2624 true chr3: 36619964-36622587 Medicago truncatula
Medtr3g080940 2.0kb downstream 2.0kb downstream 2000 false chr3: 36619964-36621963 Medicago truncatula
Medtr3g080940 5.0kb upstream 5.0kb upstream 5624 true chr3: 36621964-36627587 Medicago truncatula
Medtr3g080940 5.0kb upstream 5.0kb upstream 5000 false chr3: 36622588-36627587 Medicago truncatula
Medtr3g080940 5.0kb downstream 5.0kb downstream 5624 true chr3: 36616964-36622587 Medicago truncatula
Medtr3g080940 5.0kb downstream 5.0kb downstream 5000 false chr3: 36616964-36621963 Medicago truncatula
Medtr3g080940 10.0kb upstream 10.0kb upstream 10624 true chr3: 36621964-36632587 Medicago truncatula
Medtr3g080940 10.0kb upstream 10.0kb upstream 10000 false chr3: 36622588-36632587 Medicago truncatula
Medtr3g080940 10.0kb downstream 10.0kb downstream 10624 true chr3: 36611964-36622587 Medicago truncatula
Medtr3g080940 10.0kb downstream 10.0kb downstream 10000 false chr3: 36611964-36621963 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303860 5265 Fabidae View MSA
124069913 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain