Gene : Medtr3g080800 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11661:SF7 - 50S RIBOSOMAL PROTEIN L11, CHLOROPLASTIC-RELATED Description:  50S ribosomal protein L11P
Genomic Order:  4147 Name:  ? Medtr3g080800
Secondary Identifier:  ? PAC:31057425
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g080800 0.5kb upstream 0.5kb upstream 3190 true chr3: 36568277-36571466 Medicago truncatula
Medtr3g080800 0.5kb upstream 0.5kb upstream 500 false chr3: 36570967-36571466 Medicago truncatula
Medtr3g080800 0.5kb downstream 0.5kb downstream 3190 true chr3: 36567777-36570966 Medicago truncatula
Medtr3g080800 0.5kb downstream 0.5kb downstream 500 false chr3: 36567777-36568276 Medicago truncatula
Medtr3g080800 1.0kb upstream 1.0kb upstream 3690 true chr3: 36568277-36571966 Medicago truncatula
Medtr3g080800 1.0kb upstream 1.0kb upstream 1000 false chr3: 36570967-36571966 Medicago truncatula
Medtr3g080800 1.0kb downstream 1.0kb downstream 3690 true chr3: 36567277-36570966 Medicago truncatula
Medtr3g080800 1.0kb downstream 1.0kb downstream 1000 false chr3: 36567277-36568276 Medicago truncatula
Medtr3g080800 2.0kb upstream 2.0kb upstream 4690 true chr3: 36568277-36572966 Medicago truncatula
Medtr3g080800 2.0kb upstream 2.0kb upstream 2000 false chr3: 36570967-36572966 Medicago truncatula
Medtr3g080800 2.0kb downstream 2.0kb downstream 4690 true chr3: 36566277-36570966 Medicago truncatula
Medtr3g080800 2.0kb downstream 2.0kb downstream 2000 false chr3: 36566277-36568276 Medicago truncatula
Medtr3g080800 5.0kb upstream 5.0kb upstream 7690 true chr3: 36568277-36575966 Medicago truncatula
Medtr3g080800 5.0kb upstream 5.0kb upstream 5000 false chr3: 36570967-36575966 Medicago truncatula
Medtr3g080800 5.0kb downstream 5.0kb downstream 7690 true chr3: 36563277-36570966 Medicago truncatula
Medtr3g080800 5.0kb downstream 5.0kb downstream 5000 false chr3: 36563277-36568276 Medicago truncatula
Medtr3g080800 10.0kb upstream 10.0kb upstream 12690 true chr3: 36568277-36580966 Medicago truncatula
Medtr3g080800 10.0kb upstream 10.0kb upstream 10000 false chr3: 36570967-36580966 Medicago truncatula
Medtr3g080800 10.0kb downstream 10.0kb downstream 12690 true chr3: 36558277-36570966 Medicago truncatula
Medtr3g080800 10.0kb downstream 10.0kb downstream 10000 false chr3: 36558277-36568276 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309985 5265 Fabidae View MSA
124066181 5270 Rosid View MSA
123739165 5271 Pentapetalae View MSA
122786323 5272 Eudicot View MSA
122045285 5273 Angiosperm View MSA
121344404 5274 Embryophyte View MSA
123425186 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.261       Low
cufflinks 43.931     High High
cufflinks 21.298     High  
cufflinks 1.24        
cufflinks 39.613     High High
cufflinks 1.132        
cufflinks 0.629        
cufflinks 40.893     High High
cufflinks 1.307        

0 Strain