Gene : Medtr3g082150 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR22572:SF101 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE SMALL SUBUNIT, CHLOROPLASTIC Description:  glucose-1-phosphate adenylyltransferase family protein
Genomic Order:  4225 Name:  ? Medtr3g082150
Secondary Identifier:  ? PAC:31058385
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLYCOGENSYNTH-PWY Medicago truncatula pathologic  
Mtruncatula PWY-622 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g082150 0.5kb upstream 0.5kb upstream 4416 true chr3: 37075992-37080407 Medicago truncatula
Medtr3g082150 0.5kb upstream 0.5kb upstream 500 false chr3: 37075992-37076491 Medicago truncatula
Medtr3g082150 0.5kb downstream 0.5kb downstream 4416 true chr3: 37076492-37080907 Medicago truncatula
Medtr3g082150 0.5kb downstream 0.5kb downstream 500 false chr3: 37080408-37080907 Medicago truncatula
Medtr3g082150 1.0kb upstream 1.0kb upstream 4916 true chr3: 37075492-37080407 Medicago truncatula
Medtr3g082150 1.0kb upstream 1.0kb upstream 1000 false chr3: 37075492-37076491 Medicago truncatula
Medtr3g082150 1.0kb downstream 1.0kb downstream 4916 true chr3: 37076492-37081407 Medicago truncatula
Medtr3g082150 1.0kb downstream 1.0kb downstream 1000 false chr3: 37080408-37081407 Medicago truncatula
Medtr3g082150 2.0kb upstream 2.0kb upstream 5916 true chr3: 37074492-37080407 Medicago truncatula
Medtr3g082150 2.0kb upstream 2.0kb upstream 2000 false chr3: 37074492-37076491 Medicago truncatula
Medtr3g082150 2.0kb downstream 2.0kb downstream 5916 true chr3: 37076492-37082407 Medicago truncatula
Medtr3g082150 2.0kb downstream 2.0kb downstream 2000 false chr3: 37080408-37082407 Medicago truncatula
Medtr3g082150 5.0kb upstream 5.0kb upstream 8916 true chr3: 37071492-37080407 Medicago truncatula
Medtr3g082150 5.0kb upstream 5.0kb upstream 5000 false chr3: 37071492-37076491 Medicago truncatula
Medtr3g082150 5.0kb downstream 5.0kb downstream 8916 true chr3: 37076492-37085407 Medicago truncatula
Medtr3g082150 5.0kb downstream 5.0kb downstream 5000 false chr3: 37080408-37085407 Medicago truncatula
Medtr3g082150 10.0kb upstream 10.0kb upstream 13916 true chr3: 37066492-37080407 Medicago truncatula
Medtr3g082150 10.0kb upstream 10.0kb upstream 10000 false chr3: 37066492-37076491 Medicago truncatula
Medtr3g082150 10.0kb downstream 10.0kb downstream 13916 true chr3: 37076492-37090407 Medicago truncatula
Medtr3g082150 10.0kb downstream 10.0kb downstream 10000 false chr3: 37080408-37090407 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305164 5265 Fabidae View MSA
124067564 5270 Rosid View MSA
123737587 5271 Pentapetalae View MSA
122787627 5272 Eudicot View MSA
122044250 5273 Angiosperm View MSA
121350002 5274 Embryophyte View MSA
123424956 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.485     High High
cufflinks 20.982     High  
cufflinks 14.39     High  
cufflinks 5.436       Low
cufflinks 24.115     High  
cufflinks 2.85       Low
cufflinks 9.178        
cufflinks 13.895     High  
cufflinks 11.868     High  

0 Strain