Gene : Medtr3g082650 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN Description:  RNA recognition motif, a.k.a. RRM, RBD protein
Genomic Order:  4256 Name:  ? Medtr3g082650
Secondary Identifier:  ? PAC:31056803
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g082650 0.5kb upstream 0.5kb upstream 2675 true chr3: 37289652-37292326 Medicago truncatula
Medtr3g082650 0.5kb upstream 0.5kb upstream 500 false chr3: 37289652-37290151 Medicago truncatula
Medtr3g082650 0.5kb downstream 0.5kb downstream 2675 true chr3: 37290152-37292826 Medicago truncatula
Medtr3g082650 0.5kb downstream 0.5kb downstream 500 false chr3: 37292327-37292826 Medicago truncatula
Medtr3g082650 1.0kb upstream 1.0kb upstream 3175 true chr3: 37289152-37292326 Medicago truncatula
Medtr3g082650 1.0kb upstream 1.0kb upstream 1000 false chr3: 37289152-37290151 Medicago truncatula
Medtr3g082650 1.0kb downstream 1.0kb downstream 3175 true chr3: 37290152-37293326 Medicago truncatula
Medtr3g082650 1.0kb downstream 1.0kb downstream 1000 false chr3: 37292327-37293326 Medicago truncatula
Medtr3g082650 2.0kb upstream 2.0kb upstream 4175 true chr3: 37288152-37292326 Medicago truncatula
Medtr3g082650 2.0kb upstream 2.0kb upstream 2000 false chr3: 37288152-37290151 Medicago truncatula
Medtr3g082650 2.0kb downstream 2.0kb downstream 4175 true chr3: 37290152-37294326 Medicago truncatula
Medtr3g082650 2.0kb downstream 2.0kb downstream 2000 false chr3: 37292327-37294326 Medicago truncatula
Medtr3g082650 5.0kb upstream 5.0kb upstream 7175 true chr3: 37285152-37292326 Medicago truncatula
Medtr3g082650 5.0kb upstream 5.0kb upstream 5000 false chr3: 37285152-37290151 Medicago truncatula
Medtr3g082650 5.0kb downstream 5.0kb downstream 7175 true chr3: 37290152-37297326 Medicago truncatula
Medtr3g082650 5.0kb downstream 5.0kb downstream 5000 false chr3: 37292327-37297326 Medicago truncatula
Medtr3g082650 10.0kb upstream 10.0kb upstream 12175 true chr3: 37280152-37292326 Medicago truncatula
Medtr3g082650 10.0kb upstream 10.0kb upstream 10000 false chr3: 37280152-37290151 Medicago truncatula
Medtr3g082650 10.0kb downstream 10.0kb downstream 12175 true chr3: 37290152-37302326 Medicago truncatula
Medtr3g082650 10.0kb downstream 10.0kb downstream 10000 false chr3: 37292327-37302326 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312537 5265 Fabidae View MSA
124068124 5270 Rosid View MSA
123749875 5271 Pentapetalae View MSA
122795873 5272 Eudicot View MSA
122049849 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.03     High  
cufflinks 19.675     High  
cufflinks 23.492     High  
cufflinks 27.012     High  
cufflinks 30.192     High  
cufflinks 11.517     High Low
cufflinks 24.707     High  
cufflinks 19.433     High  
cufflinks 33.923     High High

0 Strain