Gene : Medtr3g083250 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11289 - BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2 Description:  breast cancer type 2 susceptibility protein
Genomic Order:  4297 Name:  ? Medtr3g083250
Secondary Identifier:  ? PAC:31056690
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g083250 0.5kb upstream 0.5kb upstream 8206 true chr3: 37568457-37576662 Medicago truncatula
Medtr3g083250 0.5kb upstream 0.5kb upstream 500 false chr3: 37568457-37568956 Medicago truncatula
Medtr3g083250 0.5kb downstream 0.5kb downstream 8206 true chr3: 37568957-37577162 Medicago truncatula
Medtr3g083250 0.5kb downstream 0.5kb downstream 500 false chr3: 37576663-37577162 Medicago truncatula
Medtr3g083250 1.0kb upstream 1.0kb upstream 8706 true chr3: 37567957-37576662 Medicago truncatula
Medtr3g083250 1.0kb upstream 1.0kb upstream 1000 false chr3: 37567957-37568956 Medicago truncatula
Medtr3g083250 1.0kb downstream 1.0kb downstream 8706 true chr3: 37568957-37577662 Medicago truncatula
Medtr3g083250 1.0kb downstream 1.0kb downstream 1000 false chr3: 37576663-37577662 Medicago truncatula
Medtr3g083250 2.0kb upstream 2.0kb upstream 9706 true chr3: 37566957-37576662 Medicago truncatula
Medtr3g083250 2.0kb upstream 2.0kb upstream 2000 false chr3: 37566957-37568956 Medicago truncatula
Medtr3g083250 2.0kb downstream 2.0kb downstream 9706 true chr3: 37568957-37578662 Medicago truncatula
Medtr3g083250 2.0kb downstream 2.0kb downstream 2000 false chr3: 37576663-37578662 Medicago truncatula
Medtr3g083250 5.0kb upstream 5.0kb upstream 12706 true chr3: 37563957-37576662 Medicago truncatula
Medtr3g083250 5.0kb upstream 5.0kb upstream 5000 false chr3: 37563957-37568956 Medicago truncatula
Medtr3g083250 5.0kb downstream 5.0kb downstream 12706 true chr3: 37568957-37581662 Medicago truncatula
Medtr3g083250 5.0kb downstream 5.0kb downstream 5000 false chr3: 37576663-37581662 Medicago truncatula
Medtr3g083250 10.0kb upstream 10.0kb upstream 17706 true chr3: 37558957-37576662 Medicago truncatula
Medtr3g083250 10.0kb upstream 10.0kb upstream 10000 false chr3: 37558957-37568956 Medicago truncatula
Medtr3g083250 10.0kb downstream 10.0kb downstream 17706 true chr3: 37568957-37586662 Medicago truncatula
Medtr3g083250 10.0kb downstream 10.0kb downstream 10000 false chr3: 37576663-37586662 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309422 5265 Fabidae View MSA
124050402 5270 Rosid View MSA
123749189 5271 Pentapetalae View MSA
122786519 5272 Eudicot View MSA
122044461 5273 Angiosperm View MSA
121310297 5274 Embryophyte View MSA
123425131 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.167        
cufflinks 0.118        
cufflinks 0.075     Low  
cufflinks 0.077        
cufflinks 0.088        
cufflinks 0.024     Low Low
cufflinks 0.26       High
cufflinks 0.091        
cufflinks 0.313       High

0 Strain