Gene : Medtr3g072670 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11751//PTHR11751:SF317 - SUBGROUP I AMINOTRANSFERASE RELATED Description:  aspartate aminotransferase family protein
Genomic Order:  3625 Name:  ? Medtr3g072670
Secondary Identifier:  ? PAC:31059235
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g072670 0.5kb upstream 0.5kb upstream 3351 true chr3: 32709423-32712773 Medicago truncatula
Medtr3g072670 0.5kb upstream 0.5kb upstream 500 false chr3: 32712274-32712773 Medicago truncatula
Medtr3g072670 0.5kb downstream 0.5kb downstream 3351 true chr3: 32708923-32712273 Medicago truncatula
Medtr3g072670 0.5kb downstream 0.5kb downstream 500 false chr3: 32708923-32709422 Medicago truncatula
Medtr3g072670 1.0kb upstream 1.0kb upstream 3851 true chr3: 32709423-32713273 Medicago truncatula
Medtr3g072670 1.0kb upstream 1.0kb upstream 1000 false chr3: 32712274-32713273 Medicago truncatula
Medtr3g072670 1.0kb downstream 1.0kb downstream 3851 true chr3: 32708423-32712273 Medicago truncatula
Medtr3g072670 1.0kb downstream 1.0kb downstream 1000 false chr3: 32708423-32709422 Medicago truncatula
Medtr3g072670 2.0kb upstream 2.0kb upstream 4851 true chr3: 32709423-32714273 Medicago truncatula
Medtr3g072670 2.0kb upstream 2.0kb upstream 2000 false chr3: 32712274-32714273 Medicago truncatula
Medtr3g072670 2.0kb downstream 2.0kb downstream 4851 true chr3: 32707423-32712273 Medicago truncatula
Medtr3g072670 2.0kb downstream 2.0kb downstream 2000 false chr3: 32707423-32709422 Medicago truncatula
Medtr3g072670 5.0kb upstream 5.0kb upstream 7851 true chr3: 32709423-32717273 Medicago truncatula
Medtr3g072670 5.0kb upstream 5.0kb upstream 5000 false chr3: 32712274-32717273 Medicago truncatula
Medtr3g072670 5.0kb downstream 5.0kb downstream 7851 true chr3: 32704423-32712273 Medicago truncatula
Medtr3g072670 5.0kb downstream 5.0kb downstream 5000 false chr3: 32704423-32709422 Medicago truncatula
Medtr3g072670 10.0kb upstream 10.0kb upstream 12851 true chr3: 32709423-32722273 Medicago truncatula
Medtr3g072670 10.0kb upstream 10.0kb upstream 10000 false chr3: 32712274-32722273 Medicago truncatula
Medtr3g072670 10.0kb downstream 10.0kb downstream 12851 true chr3: 32699423-32712273 Medicago truncatula
Medtr3g072670 10.0kb downstream 10.0kb downstream 10000 false chr3: 32699423-32709422 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306615 5265 Fabidae View MSA
124063463 5270 Rosid View MSA
123739507 5271 Pentapetalae View MSA
122790379 5272 Eudicot View MSA
122042805 5273 Angiosperm View MSA
121346354 5274 Embryophyte View MSA
123424260 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.634        
cufflinks 12.931     High  
cufflinks 12.747     High  
cufflinks 14.112     High  
cufflinks 17.713     High High
cufflinks 7.256       Low
cufflinks 7.762       Low
cufflinks 11.051     High  
cufflinks 15.809     High  

0 Strain