Gene : Medtr3g073990 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31614:SF5 - ALLERGEN-LIKE PROTEIN BRSN20-RELATED Description:  pollen Ole e I family allergens
Genomic Order:  3716 Name:  ? Medtr3g073990
Secondary Identifier:  ? PAC:31059414
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g073990 0.5kb upstream 0.5kb upstream 2650 true chr3: 33393082-33395731 Medicago truncatula
Medtr3g073990 0.5kb upstream 0.5kb upstream 500 false chr3: 33393082-33393581 Medicago truncatula
Medtr3g073990 0.5kb downstream 0.5kb downstream 2650 true chr3: 33393582-33396231 Medicago truncatula
Medtr3g073990 0.5kb downstream 0.5kb downstream 500 false chr3: 33395732-33396231 Medicago truncatula
Medtr3g073990 1.0kb upstream 1.0kb upstream 3150 true chr3: 33392582-33395731 Medicago truncatula
Medtr3g073990 1.0kb upstream 1.0kb upstream 1000 false chr3: 33392582-33393581 Medicago truncatula
Medtr3g073990 1.0kb downstream 1.0kb downstream 3150 true chr3: 33393582-33396731 Medicago truncatula
Medtr3g073990 1.0kb downstream 1.0kb downstream 1000 false chr3: 33395732-33396731 Medicago truncatula
Medtr3g073990 2.0kb upstream 2.0kb upstream 4150 true chr3: 33391582-33395731 Medicago truncatula
Medtr3g073990 2.0kb upstream 2.0kb upstream 2000 false chr3: 33391582-33393581 Medicago truncatula
Medtr3g073990 2.0kb downstream 2.0kb downstream 4150 true chr3: 33393582-33397731 Medicago truncatula
Medtr3g073990 2.0kb downstream 2.0kb downstream 2000 false chr3: 33395732-33397731 Medicago truncatula
Medtr3g073990 5.0kb upstream 5.0kb upstream 7150 true chr3: 33388582-33395731 Medicago truncatula
Medtr3g073990 5.0kb upstream 5.0kb upstream 5000 false chr3: 33388582-33393581 Medicago truncatula
Medtr3g073990 5.0kb downstream 5.0kb downstream 7150 true chr3: 33393582-33400731 Medicago truncatula
Medtr3g073990 5.0kb downstream 5.0kb downstream 5000 false chr3: 33395732-33400731 Medicago truncatula
Medtr3g073990 10.0kb upstream 10.0kb upstream 12150 true chr3: 33383582-33395731 Medicago truncatula
Medtr3g073990 10.0kb upstream 10.0kb upstream 10000 false chr3: 33383582-33393581 Medicago truncatula
Medtr3g073990 10.0kb downstream 10.0kb downstream 12150 true chr3: 33393582-33405731 Medicago truncatula
Medtr3g073990 10.0kb downstream 10.0kb downstream 10000 false chr3: 33395732-33405731 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311401 5265 Fabidae View MSA
124073821 5270 Rosid View MSA
123742086 5271 Pentapetalae View MSA
122796154 5272 Eudicot View MSA
122045197 5273 Angiosperm View MSA
121310413 5274 Embryophyte View MSA
123347903 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.27     High  
cufflinks 114.066     High  
cufflinks 53.828     High Low
cufflinks 191.11     High High
cufflinks 89.173     High  
cufflinks 86.971     High  
cufflinks 102.535     High  
cufflinks 62.058     High  
cufflinks 279.73     High High

0 Strain