Gene : Medtr3g076540 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR24058//PTHR24058:SF58 - DUAL SPECIFICITY PROTEIN KINASE Description:  kinase AFC1
Genomic Order:  3849 Name:  ? Medtr3g076540
Secondary Identifier:  ? PAC:31053329
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g076540 0.5kb upstream 0.5kb upstream 4628 true chr3: 34408145-34412772 Medicago truncatula
Medtr3g076540 0.5kb upstream 0.5kb upstream 500 false chr3: 34408145-34408644 Medicago truncatula
Medtr3g076540 0.5kb downstream 0.5kb downstream 4628 true chr3: 34408645-34413272 Medicago truncatula
Medtr3g076540 0.5kb downstream 0.5kb downstream 500 false chr3: 34412773-34413272 Medicago truncatula
Medtr3g076540 1.0kb upstream 1.0kb upstream 5128 true chr3: 34407645-34412772 Medicago truncatula
Medtr3g076540 1.0kb upstream 1.0kb upstream 1000 false chr3: 34407645-34408644 Medicago truncatula
Medtr3g076540 1.0kb downstream 1.0kb downstream 5128 true chr3: 34408645-34413772 Medicago truncatula
Medtr3g076540 1.0kb downstream 1.0kb downstream 1000 false chr3: 34412773-34413772 Medicago truncatula
Medtr3g076540 2.0kb upstream 2.0kb upstream 6128 true chr3: 34406645-34412772 Medicago truncatula
Medtr3g076540 2.0kb upstream 2.0kb upstream 2000 false chr3: 34406645-34408644 Medicago truncatula
Medtr3g076540 2.0kb downstream 2.0kb downstream 6128 true chr3: 34408645-34414772 Medicago truncatula
Medtr3g076540 2.0kb downstream 2.0kb downstream 2000 false chr3: 34412773-34414772 Medicago truncatula
Medtr3g076540 5.0kb upstream 5.0kb upstream 9128 true chr3: 34403645-34412772 Medicago truncatula
Medtr3g076540 5.0kb upstream 5.0kb upstream 5000 false chr3: 34403645-34408644 Medicago truncatula
Medtr3g076540 5.0kb downstream 5.0kb downstream 9128 true chr3: 34408645-34417772 Medicago truncatula
Medtr3g076540 5.0kb downstream 5.0kb downstream 5000 false chr3: 34412773-34417772 Medicago truncatula
Medtr3g076540 10.0kb upstream 10.0kb upstream 14128 true chr3: 34398645-34412772 Medicago truncatula
Medtr3g076540 10.0kb upstream 10.0kb upstream 10000 false chr3: 34398645-34408644 Medicago truncatula
Medtr3g076540 10.0kb downstream 10.0kb downstream 14128 true chr3: 34408645-34422772 Medicago truncatula
Medtr3g076540 10.0kb downstream 10.0kb downstream 10000 false chr3: 34412773-34422772 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298533 5265 Fabidae View MSA
124066575 5270 Rosid View MSA
123751115 5271 Pentapetalae View MSA
122792813 5272 Eudicot View MSA
122041750 5273 Angiosperm View MSA
121349585 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.523        
cufflinks 4.543       High
cufflinks 4.167        
cufflinks 1.883       Low
cufflinks 3.983        
cufflinks 2.213       Low
cufflinks 3.022        
cufflinks 4.101        
cufflinks 2.749        

0 Strain