Gene : Medtr3g075460 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF08167 - rRNA processing/ribosome biogenesis (RIX1) Description:  rRNA processing/ribosome biogenesis protein
Genomic Order:  3841 Name:  ? Medtr3g075460
Secondary Identifier:  ? PAC:31056119
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g075460 0.5kb upstream 0.5kb upstream 12756 true chr3: 34352574-34365329 Medicago truncatula
Medtr3g075460 0.5kb upstream 0.5kb upstream 500 false chr3: 34364830-34365329 Medicago truncatula
Medtr3g075460 0.5kb downstream 0.5kb downstream 12756 true chr3: 34352074-34364829 Medicago truncatula
Medtr3g075460 0.5kb downstream 0.5kb downstream 500 false chr3: 34352074-34352573 Medicago truncatula
Medtr3g075460 1.0kb upstream 1.0kb upstream 13256 true chr3: 34352574-34365829 Medicago truncatula
Medtr3g075460 1.0kb upstream 1.0kb upstream 1000 false chr3: 34364830-34365829 Medicago truncatula
Medtr3g075460 1.0kb downstream 1.0kb downstream 13256 true chr3: 34351574-34364829 Medicago truncatula
Medtr3g075460 1.0kb downstream 1.0kb downstream 1000 false chr3: 34351574-34352573 Medicago truncatula
Medtr3g075460 2.0kb upstream 2.0kb upstream 14256 true chr3: 34352574-34366829 Medicago truncatula
Medtr3g075460 2.0kb upstream 2.0kb upstream 2000 false chr3: 34364830-34366829 Medicago truncatula
Medtr3g075460 2.0kb downstream 2.0kb downstream 14256 true chr3: 34350574-34364829 Medicago truncatula
Medtr3g075460 2.0kb downstream 2.0kb downstream 2000 false chr3: 34350574-34352573 Medicago truncatula
Medtr3g075460 5.0kb upstream 5.0kb upstream 17256 true chr3: 34352574-34369829 Medicago truncatula
Medtr3g075460 5.0kb upstream 5.0kb upstream 5000 false chr3: 34364830-34369829 Medicago truncatula
Medtr3g075460 5.0kb downstream 5.0kb downstream 17256 true chr3: 34347574-34364829 Medicago truncatula
Medtr3g075460 5.0kb downstream 5.0kb downstream 5000 false chr3: 34347574-34352573 Medicago truncatula
Medtr3g075460 10.0kb upstream 10.0kb upstream 22256 true chr3: 34352574-34374829 Medicago truncatula
Medtr3g075460 10.0kb upstream 10.0kb upstream 10000 false chr3: 34364830-34374829 Medicago truncatula
Medtr3g075460 10.0kb downstream 10.0kb downstream 22256 true chr3: 34342574-34364829 Medicago truncatula
Medtr3g075460 10.0kb downstream 10.0kb downstream 10000 false chr3: 34342574-34352573 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305656 5265 Fabidae View MSA
124050381 5270 Rosid View MSA
123750218 5271 Pentapetalae View MSA
122787219 5272 Eudicot View MSA
122050850 5273 Angiosperm View MSA
121349026 5274 Embryophyte View MSA
123425273 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.325        
cufflinks 0.341        
cufflinks 0.528        
cufflinks 0.101        
cufflinks 0.538        
cufflinks 0.009     Low Low
cufflinks 0.253        
cufflinks 0.383        
cufflinks 0.251        

0 Strain