Gene : Medtr3g076630 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Description:  pyruvate dehydrogenase E1 beta subunit
Genomic Order:  3855 Name:  ? Medtr3g076630
Secondary Identifier:  ? PAC:31058493
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5173 Medicago truncatula pathologic  
Mtruncatula PWY-5464 Medicago truncatula pathologic  
Mtruncatula PYRUVDEHYD-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g076630 0.5kb upstream 0.5kb upstream 3662 true chr3: 34442445-34446106 Medicago truncatula
Medtr3g076630 0.5kb upstream 0.5kb upstream 500 false chr3: 34442445-34442944 Medicago truncatula
Medtr3g076630 0.5kb downstream 0.5kb downstream 3662 true chr3: 34442945-34446606 Medicago truncatula
Medtr3g076630 0.5kb downstream 0.5kb downstream 500 false chr3: 34446107-34446606 Medicago truncatula
Medtr3g076630 1.0kb upstream 1.0kb upstream 4162 true chr3: 34441945-34446106 Medicago truncatula
Medtr3g076630 1.0kb upstream 1.0kb upstream 1000 false chr3: 34441945-34442944 Medicago truncatula
Medtr3g076630 1.0kb downstream 1.0kb downstream 4162 true chr3: 34442945-34447106 Medicago truncatula
Medtr3g076630 1.0kb downstream 1.0kb downstream 1000 false chr3: 34446107-34447106 Medicago truncatula
Medtr3g076630 2.0kb upstream 2.0kb upstream 5162 true chr3: 34440945-34446106 Medicago truncatula
Medtr3g076630 2.0kb upstream 2.0kb upstream 2000 false chr3: 34440945-34442944 Medicago truncatula
Medtr3g076630 2.0kb downstream 2.0kb downstream 5162 true chr3: 34442945-34448106 Medicago truncatula
Medtr3g076630 2.0kb downstream 2.0kb downstream 2000 false chr3: 34446107-34448106 Medicago truncatula
Medtr3g076630 5.0kb upstream 5.0kb upstream 8162 true chr3: 34437945-34446106 Medicago truncatula
Medtr3g076630 5.0kb upstream 5.0kb upstream 5000 false chr3: 34437945-34442944 Medicago truncatula
Medtr3g076630 5.0kb downstream 5.0kb downstream 8162 true chr3: 34442945-34451106 Medicago truncatula
Medtr3g076630 5.0kb downstream 5.0kb downstream 5000 false chr3: 34446107-34451106 Medicago truncatula
Medtr3g076630 10.0kb upstream 10.0kb upstream 13162 true chr3: 34432945-34446106 Medicago truncatula
Medtr3g076630 10.0kb upstream 10.0kb upstream 10000 false chr3: 34432945-34442944 Medicago truncatula
Medtr3g076630 10.0kb downstream 10.0kb downstream 13162 true chr3: 34442945-34456106 Medicago truncatula
Medtr3g076630 10.0kb downstream 10.0kb downstream 10000 false chr3: 34446107-34456106 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306477 5265 Fabidae View MSA
124062960 5270 Rosid View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.715       Low
cufflinks 13.813     High  
cufflinks 9.647        
cufflinks 6.735        
cufflinks 13.14     High  
cufflinks 1.854       Low
cufflinks 5.752        
cufflinks 13.034     High  
cufflinks 10.566     High  

0 Strain