Gene : Medtr3g067695 M. truncatula Mt4.0v1
Defline:  (1 of 3) 3.4.21.108 - HtrA2 peptidase / Serine proteinase OMI Description:  DegP protease-like protein
Genomic Order:  3298 Name:  ? Medtr3g067695
Secondary Identifier:  ? PAC:31060383
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g067695 0.5kb upstream 0.5kb upstream 16768 true chr3: 30320423-30337190 Medicago truncatula
Medtr3g067695 0.5kb upstream 0.5kb upstream 500 false chr3: 30320423-30320922 Medicago truncatula
Medtr3g067695 0.5kb downstream 0.5kb downstream 16768 true chr3: 30320923-30337690 Medicago truncatula
Medtr3g067695 0.5kb downstream 0.5kb downstream 500 false chr3: 30337191-30337690 Medicago truncatula
Medtr3g067695 1.0kb upstream 1.0kb upstream 17268 true chr3: 30319923-30337190 Medicago truncatula
Medtr3g067695 1.0kb upstream 1.0kb upstream 1000 false chr3: 30319923-30320922 Medicago truncatula
Medtr3g067695 1.0kb downstream 1.0kb downstream 17268 true chr3: 30320923-30338190 Medicago truncatula
Medtr3g067695 1.0kb downstream 1.0kb downstream 1000 false chr3: 30337191-30338190 Medicago truncatula
Medtr3g067695 2.0kb upstream 2.0kb upstream 18268 true chr3: 30318923-30337190 Medicago truncatula
Medtr3g067695 2.0kb upstream 2.0kb upstream 2000 false chr3: 30318923-30320922 Medicago truncatula
Medtr3g067695 2.0kb downstream 2.0kb downstream 18268 true chr3: 30320923-30339190 Medicago truncatula
Medtr3g067695 2.0kb downstream 2.0kb downstream 2000 false chr3: 30337191-30339190 Medicago truncatula
Medtr3g067695 5.0kb upstream 5.0kb upstream 21268 true chr3: 30315923-30337190 Medicago truncatula
Medtr3g067695 5.0kb upstream 5.0kb upstream 5000 false chr3: 30315923-30320922 Medicago truncatula
Medtr3g067695 5.0kb downstream 5.0kb downstream 21268 true chr3: 30320923-30342190 Medicago truncatula
Medtr3g067695 5.0kb downstream 5.0kb downstream 5000 false chr3: 30337191-30342190 Medicago truncatula
Medtr3g067695 10.0kb upstream 10.0kb upstream 26268 true chr3: 30310923-30337190 Medicago truncatula
Medtr3g067695 10.0kb upstream 10.0kb upstream 10000 false chr3: 30310923-30320922 Medicago truncatula
Medtr3g067695 10.0kb downstream 10.0kb downstream 26268 true chr3: 30320923-30347190 Medicago truncatula
Medtr3g067695 10.0kb downstream 10.0kb downstream 10000 false chr3: 30337191-30347190 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122260854 5265 Fabidae Singleton cluster - no MSA
124066487 5270 Rosid View MSA
123749112 5271 Pentapetalae View MSA
122789271 5272 Eudicot View MSA
122042652 5273 Angiosperm View MSA
121347619 5274 Embryophyte View MSA
123428262 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.245        
cufflinks 1.679        
cufflinks 2.007        
cufflinks 0.387        
cufflinks 2.303        
cufflinks 0.053     Low Low
cufflinks 0.818        
cufflinks 1.554        
cufflinks 1.168        

0 Strain