Gene : Medtr3g070230 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF07014 - Hs1pro-1 protein C-terminus (Hs1pro-1_C) Description:  nematode resistance HSPRO2-like protein
Genomic Order:  3459 Name:  ? Medtr3g070230
Secondary Identifier:  ? PAC:31056900
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g070230 0.5kb upstream 0.5kb upstream 2289 true chr3: 31472358-31474646 Medicago truncatula
Medtr3g070230 0.5kb upstream 0.5kb upstream 500 false chr3: 31474147-31474646 Medicago truncatula
Medtr3g070230 0.5kb downstream 0.5kb downstream 2289 true chr3: 31471858-31474146 Medicago truncatula
Medtr3g070230 0.5kb downstream 0.5kb downstream 500 false chr3: 31471858-31472357 Medicago truncatula
Medtr3g070230 1.0kb upstream 1.0kb upstream 2789 true chr3: 31472358-31475146 Medicago truncatula
Medtr3g070230 1.0kb upstream 1.0kb upstream 1000 false chr3: 31474147-31475146 Medicago truncatula
Medtr3g070230 1.0kb downstream 1.0kb downstream 2789 true chr3: 31471358-31474146 Medicago truncatula
Medtr3g070230 1.0kb downstream 1.0kb downstream 1000 false chr3: 31471358-31472357 Medicago truncatula
Medtr3g070230 2.0kb upstream 2.0kb upstream 3789 true chr3: 31472358-31476146 Medicago truncatula
Medtr3g070230 2.0kb upstream 2.0kb upstream 2000 false chr3: 31474147-31476146 Medicago truncatula
Medtr3g070230 2.0kb downstream 2.0kb downstream 3789 true chr3: 31470358-31474146 Medicago truncatula
Medtr3g070230 2.0kb downstream 2.0kb downstream 2000 false chr3: 31470358-31472357 Medicago truncatula
Medtr3g070230 5.0kb upstream 5.0kb upstream 6789 true chr3: 31472358-31479146 Medicago truncatula
Medtr3g070230 5.0kb upstream 5.0kb upstream 5000 false chr3: 31474147-31479146 Medicago truncatula
Medtr3g070230 5.0kb downstream 5.0kb downstream 6789 true chr3: 31467358-31474146 Medicago truncatula
Medtr3g070230 5.0kb downstream 5.0kb downstream 5000 false chr3: 31467358-31472357 Medicago truncatula
Medtr3g070230 10.0kb upstream 10.0kb upstream 11789 true chr3: 31472358-31484146 Medicago truncatula
Medtr3g070230 10.0kb upstream 10.0kb upstream 10000 false chr3: 31474147-31484146 Medicago truncatula
Medtr3g070230 10.0kb downstream 10.0kb downstream 11789 true chr3: 31462358-31474146 Medicago truncatula
Medtr3g070230 10.0kb downstream 10.0kb downstream 10000 false chr3: 31462358-31472357 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306387 5265 Fabidae View MSA
124067891 5270 Rosid View MSA
123747109 5271 Pentapetalae View MSA
122789570 5272 Eudicot View MSA
122043569 5273 Angiosperm View MSA
121344481 5274 Embryophyte View MSA
123380055 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 521.909     High  
cufflinks 345.185     High Low
cufflinks 532.271     High  
cufflinks 557.26     High  
cufflinks 368.752     High  
cufflinks 411.714     High  
cufflinks 1229.189     High High
cufflinks 483.852     High  
cufflinks 1381.531     High High

0 Strain