Gene : Medtr3g070340 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC Description:  light-harvesting complex I chlorophyll A/B-binding protein
Genomic Order:  3468 Name:  ? Medtr3g070340
Secondary Identifier:  ? PAC:31057303
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g070340 0.5kb upstream 0.5kb upstream 3263 true chr3: 31533674-31536936 Medicago truncatula
Medtr3g070340 0.5kb upstream 0.5kb upstream 500 false chr3: 31536437-31536936 Medicago truncatula
Medtr3g070340 0.5kb downstream 0.5kb downstream 3263 true chr3: 31533174-31536436 Medicago truncatula
Medtr3g070340 0.5kb downstream 0.5kb downstream 500 false chr3: 31533174-31533673 Medicago truncatula
Medtr3g070340 1.0kb upstream 1.0kb upstream 3763 true chr3: 31533674-31537436 Medicago truncatula
Medtr3g070340 1.0kb upstream 1.0kb upstream 1000 false chr3: 31536437-31537436 Medicago truncatula
Medtr3g070340 1.0kb downstream 1.0kb downstream 3763 true chr3: 31532674-31536436 Medicago truncatula
Medtr3g070340 1.0kb downstream 1.0kb downstream 1000 false chr3: 31532674-31533673 Medicago truncatula
Medtr3g070340 2.0kb upstream 2.0kb upstream 4763 true chr3: 31533674-31538436 Medicago truncatula
Medtr3g070340 2.0kb upstream 2.0kb upstream 2000 false chr3: 31536437-31538436 Medicago truncatula
Medtr3g070340 2.0kb downstream 2.0kb downstream 4763 true chr3: 31531674-31536436 Medicago truncatula
Medtr3g070340 2.0kb downstream 2.0kb downstream 2000 false chr3: 31531674-31533673 Medicago truncatula
Medtr3g070340 5.0kb upstream 5.0kb upstream 7763 true chr3: 31533674-31541436 Medicago truncatula
Medtr3g070340 5.0kb upstream 5.0kb upstream 5000 false chr3: 31536437-31541436 Medicago truncatula
Medtr3g070340 5.0kb downstream 5.0kb downstream 7763 true chr3: 31528674-31536436 Medicago truncatula
Medtr3g070340 5.0kb downstream 5.0kb downstream 5000 false chr3: 31528674-31533673 Medicago truncatula
Medtr3g070340 10.0kb upstream 10.0kb upstream 12763 true chr3: 31533674-31546436 Medicago truncatula
Medtr3g070340 10.0kb upstream 10.0kb upstream 10000 false chr3: 31536437-31546436 Medicago truncatula
Medtr3g070340 10.0kb downstream 10.0kb downstream 12763 true chr3: 31523674-31536436 Medicago truncatula
Medtr3g070340 10.0kb downstream 10.0kb downstream 10000 false chr3: 31523674-31533673 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780059 5273 Angiosperm View MSA
122301220 5265 Fabidae View MSA
124050329 5270 Rosid View MSA
123744936 5271 Pentapetalae View MSA
122771305 5272 Eudicot View MSA
121051692 5274 Embryophyte View MSA
123428168 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low Low
cufflinks 719.741     High  
cufflinks 504.398     High  
cufflinks 0.017     Low Low
cufflinks 507.324     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.101        
cufflinks 634.985     High  
cufflinks 0.043     Low  

0 Strain