Gene : Medtr3g070070 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR20902 - 41-2 PROTEIN ANTIGEN-RELATED Description:  transporter particle (TRAPP) protein
Genomic Order:  3444 Name:  ? Medtr3g070070
Secondary Identifier:  ? PAC:31053267
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g070070 0.5kb upstream 0.5kb upstream 5761 true chr3: 31372666-31378426 Medicago truncatula
Medtr3g070070 0.5kb upstream 0.5kb upstream 500 false chr3: 31372666-31373165 Medicago truncatula
Medtr3g070070 0.5kb downstream 0.5kb downstream 5761 true chr3: 31373166-31378926 Medicago truncatula
Medtr3g070070 0.5kb downstream 0.5kb downstream 500 false chr3: 31378427-31378926 Medicago truncatula
Medtr3g070070 1.0kb upstream 1.0kb upstream 6261 true chr3: 31372166-31378426 Medicago truncatula
Medtr3g070070 1.0kb upstream 1.0kb upstream 1000 false chr3: 31372166-31373165 Medicago truncatula
Medtr3g070070 1.0kb downstream 1.0kb downstream 6261 true chr3: 31373166-31379426 Medicago truncatula
Medtr3g070070 1.0kb downstream 1.0kb downstream 1000 false chr3: 31378427-31379426 Medicago truncatula
Medtr3g070070 2.0kb upstream 2.0kb upstream 7261 true chr3: 31371166-31378426 Medicago truncatula
Medtr3g070070 2.0kb upstream 2.0kb upstream 2000 false chr3: 31371166-31373165 Medicago truncatula
Medtr3g070070 2.0kb downstream 2.0kb downstream 7261 true chr3: 31373166-31380426 Medicago truncatula
Medtr3g070070 2.0kb downstream 2.0kb downstream 2000 false chr3: 31378427-31380426 Medicago truncatula
Medtr3g070070 5.0kb upstream 5.0kb upstream 10261 true chr3: 31368166-31378426 Medicago truncatula
Medtr3g070070 5.0kb upstream 5.0kb upstream 5000 false chr3: 31368166-31373165 Medicago truncatula
Medtr3g070070 5.0kb downstream 5.0kb downstream 10261 true chr3: 31373166-31383426 Medicago truncatula
Medtr3g070070 5.0kb downstream 5.0kb downstream 5000 false chr3: 31378427-31383426 Medicago truncatula
Medtr3g070070 10.0kb upstream 10.0kb upstream 15261 true chr3: 31363166-31378426 Medicago truncatula
Medtr3g070070 10.0kb upstream 10.0kb upstream 10000 false chr3: 31363166-31373165 Medicago truncatula
Medtr3g070070 10.0kb downstream 10.0kb downstream 15261 true chr3: 31373166-31388426 Medicago truncatula
Medtr3g070070 10.0kb downstream 10.0kb downstream 10000 false chr3: 31378427-31388426 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314696 5265 Fabidae View MSA
124065767 5270 Rosid View MSA
123745459 5271 Pentapetalae View MSA
122785825 5272 Eudicot View MSA
122045467 5273 Angiosperm View MSA
121344565 5274 Embryophyte View MSA
123425941 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.94       Low
cufflinks 5.999        
cufflinks 5.587        
cufflinks 3.358        
cufflinks 7.155       High
cufflinks 1.551       Low
cufflinks 2.677        
cufflinks 5.419        
cufflinks 3.704        

0 Strain