Gene : Medtr3g070500 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Description:  peptidyl-prolyl cis-trans isomerase
Genomic Order:  3481 Name:  ? Medtr3g070500
Secondary Identifier:  ? PAC:31053258
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g070500 0.5kb upstream 0.5kb upstream 4111 true chr3: 31631615-31635725 Medicago truncatula
Medtr3g070500 0.5kb upstream 0.5kb upstream 500 false chr3: 31635226-31635725 Medicago truncatula
Medtr3g070500 0.5kb downstream 0.5kb downstream 4111 true chr3: 31631115-31635225 Medicago truncatula
Medtr3g070500 0.5kb downstream 0.5kb downstream 500 false chr3: 31631115-31631614 Medicago truncatula
Medtr3g070500 1.0kb upstream 1.0kb upstream 4611 true chr3: 31631615-31636225 Medicago truncatula
Medtr3g070500 1.0kb upstream 1.0kb upstream 1000 false chr3: 31635226-31636225 Medicago truncatula
Medtr3g070500 1.0kb downstream 1.0kb downstream 4611 true chr3: 31630615-31635225 Medicago truncatula
Medtr3g070500 1.0kb downstream 1.0kb downstream 1000 false chr3: 31630615-31631614 Medicago truncatula
Medtr3g070500 2.0kb upstream 2.0kb upstream 5611 true chr3: 31631615-31637225 Medicago truncatula
Medtr3g070500 2.0kb upstream 2.0kb upstream 2000 false chr3: 31635226-31637225 Medicago truncatula
Medtr3g070500 2.0kb downstream 2.0kb downstream 5611 true chr3: 31629615-31635225 Medicago truncatula
Medtr3g070500 2.0kb downstream 2.0kb downstream 2000 false chr3: 31629615-31631614 Medicago truncatula
Medtr3g070500 5.0kb upstream 5.0kb upstream 8611 true chr3: 31631615-31640225 Medicago truncatula
Medtr3g070500 5.0kb upstream 5.0kb upstream 5000 false chr3: 31635226-31640225 Medicago truncatula
Medtr3g070500 5.0kb downstream 5.0kb downstream 8611 true chr3: 31626615-31635225 Medicago truncatula
Medtr3g070500 5.0kb downstream 5.0kb downstream 5000 false chr3: 31626615-31631614 Medicago truncatula
Medtr3g070500 10.0kb upstream 10.0kb upstream 13611 true chr3: 31631615-31645225 Medicago truncatula
Medtr3g070500 10.0kb upstream 10.0kb upstream 10000 false chr3: 31635226-31645225 Medicago truncatula
Medtr3g070500 10.0kb downstream 10.0kb downstream 13611 true chr3: 31621615-31635225 Medicago truncatula
Medtr3g070500 10.0kb downstream 10.0kb downstream 10000 false chr3: 31621615-31631614 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311388 5265 Fabidae View MSA
124064129 5270 Rosid View MSA
123745258 5271 Pentapetalae View MSA
122785870 5272 Eudicot View MSA
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.485        
cufflinks 0.431        
cufflinks 0.328        
cufflinks 0.218        
cufflinks 0.452        
cufflinks 0.051     Low Low
cufflinks 0.352        
cufflinks 0.328        
cufflinks 0.231        

0 Strain