Gene : Medtr3g071970 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Description:  DUF399 family protein
Genomic Order:  3567 Name:  ? Medtr3g071970
Secondary Identifier:  ? PAC:31060770
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g071970 0.5kb upstream 0.5kb upstream 7191 true chr3: 32329669-32336859 Medicago truncatula
Medtr3g071970 0.5kb upstream 0.5kb upstream 500 false chr3: 32329669-32330168 Medicago truncatula
Medtr3g071970 0.5kb downstream 0.5kb downstream 7191 true chr3: 32330169-32337359 Medicago truncatula
Medtr3g071970 0.5kb downstream 0.5kb downstream 500 false chr3: 32336860-32337359 Medicago truncatula
Medtr3g071970 1.0kb upstream 1.0kb upstream 7691 true chr3: 32329169-32336859 Medicago truncatula
Medtr3g071970 1.0kb upstream 1.0kb upstream 1000 false chr3: 32329169-32330168 Medicago truncatula
Medtr3g071970 1.0kb downstream 1.0kb downstream 7691 true chr3: 32330169-32337859 Medicago truncatula
Medtr3g071970 1.0kb downstream 1.0kb downstream 1000 false chr3: 32336860-32337859 Medicago truncatula
Medtr3g071970 2.0kb upstream 2.0kb upstream 8691 true chr3: 32328169-32336859 Medicago truncatula
Medtr3g071970 2.0kb upstream 2.0kb upstream 2000 false chr3: 32328169-32330168 Medicago truncatula
Medtr3g071970 2.0kb downstream 2.0kb downstream 8691 true chr3: 32330169-32338859 Medicago truncatula
Medtr3g071970 2.0kb downstream 2.0kb downstream 2000 false chr3: 32336860-32338859 Medicago truncatula
Medtr3g071970 5.0kb upstream 5.0kb upstream 11691 true chr3: 32325169-32336859 Medicago truncatula
Medtr3g071970 5.0kb upstream 5.0kb upstream 5000 false chr3: 32325169-32330168 Medicago truncatula
Medtr3g071970 5.0kb downstream 5.0kb downstream 11691 true chr3: 32330169-32341859 Medicago truncatula
Medtr3g071970 5.0kb downstream 5.0kb downstream 5000 false chr3: 32336860-32341859 Medicago truncatula
Medtr3g071970 10.0kb upstream 10.0kb upstream 16691 true chr3: 32320169-32336859 Medicago truncatula
Medtr3g071970 10.0kb upstream 10.0kb upstream 10000 false chr3: 32320169-32330168 Medicago truncatula
Medtr3g071970 10.0kb downstream 10.0kb downstream 16691 true chr3: 32330169-32346859 Medicago truncatula
Medtr3g071970 10.0kb downstream 10.0kb downstream 10000 false chr3: 32336860-32346859 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308988 5265 Fabidae View MSA
124063708 5270 Rosid View MSA
123737054 5271 Pentapetalae View MSA
122790914 5272 Eudicot View MSA
122041668 5273 Angiosperm View MSA
121345431 5274 Embryophyte View MSA
123380215 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.828     High  
cufflinks 58.28     High High
cufflinks 48.458     High  
cufflinks 7.738       Low
cufflinks 36.035     High  
cufflinks 5.538       Low
cufflinks 18.011     High  
cufflinks 60.58     High High
cufflinks 15.964     High  

0 Strain