Gene : Medtr3g058430 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11700:SF9 - 37S RIBOSOMAL PROTEIN S10, MITOCHONDRIAL Description:  30S ribosomal protein S10
Genomic Order:  2403 Name:  ? Medtr3g058430
Secondary Identifier:  ? PAC:31060132
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g058430 0.5kb upstream 0.5kb upstream 3669 true chr3: 23185134-23188802 Medicago truncatula
Medtr3g058430 0.5kb upstream 0.5kb upstream 500 false chr3: 23188303-23188802 Medicago truncatula
Medtr3g058430 0.5kb downstream 0.5kb downstream 3669 true chr3: 23184634-23188302 Medicago truncatula
Medtr3g058430 0.5kb downstream 0.5kb downstream 500 false chr3: 23184634-23185133 Medicago truncatula
Medtr3g058430 1.0kb upstream 1.0kb upstream 4169 true chr3: 23185134-23189302 Medicago truncatula
Medtr3g058430 1.0kb upstream 1.0kb upstream 1000 false chr3: 23188303-23189302 Medicago truncatula
Medtr3g058430 1.0kb downstream 1.0kb downstream 4169 true chr3: 23184134-23188302 Medicago truncatula
Medtr3g058430 1.0kb downstream 1.0kb downstream 1000 false chr3: 23184134-23185133 Medicago truncatula
Medtr3g058430 2.0kb upstream 2.0kb upstream 5169 true chr3: 23185134-23190302 Medicago truncatula
Medtr3g058430 2.0kb upstream 2.0kb upstream 2000 false chr3: 23188303-23190302 Medicago truncatula
Medtr3g058430 2.0kb downstream 2.0kb downstream 5169 true chr3: 23183134-23188302 Medicago truncatula
Medtr3g058430 2.0kb downstream 2.0kb downstream 2000 false chr3: 23183134-23185133 Medicago truncatula
Medtr3g058430 5.0kb upstream 5.0kb upstream 8169 true chr3: 23185134-23193302 Medicago truncatula
Medtr3g058430 5.0kb upstream 5.0kb upstream 5000 false chr3: 23188303-23193302 Medicago truncatula
Medtr3g058430 5.0kb downstream 5.0kb downstream 8169 true chr3: 23180134-23188302 Medicago truncatula
Medtr3g058430 5.0kb downstream 5.0kb downstream 5000 false chr3: 23180134-23185133 Medicago truncatula
Medtr3g058430 10.0kb upstream 10.0kb upstream 13169 true chr3: 23185134-23198302 Medicago truncatula
Medtr3g058430 10.0kb upstream 10.0kb upstream 10000 false chr3: 23188303-23198302 Medicago truncatula
Medtr3g058430 10.0kb downstream 10.0kb downstream 13169 true chr3: 23175134-23188302 Medicago truncatula
Medtr3g058430 10.0kb downstream 10.0kb downstream 10000 false chr3: 23175134-23185133 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026497 5273 Angiosperm View MSA
122306608 5265 Fabidae View MSA
124068584 5270 Rosid View MSA
123745585 5271 Pentapetalae View MSA
122786929 5272 Eudicot View MSA
121343916 5274 Embryophyte View MSA
123426498 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.587        
cufflinks 58.367     High High
cufflinks 47.69     High  
cufflinks 2.527        
cufflinks 68.697     High High
cufflinks 1.173       Low
cufflinks 3.433        
cufflinks 59.043     High High
cufflinks 1.671        

0 Strain