Gene : Medtr3g059000 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24012:SF425 - F3F19.21 PROTEIN Description:  RNA recognition motif, a.k.a. RRM, RBD protein
Genomic Order:  2449 Name:  ? Medtr3g059000
Secondary Identifier:  ? PAC:31060959
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g059000 0.5kb upstream 0.5kb upstream 5048 true chr3: 23586291-23591338 Medicago truncatula
Medtr3g059000 0.5kb upstream 0.5kb upstream 500 false chr3: 23590839-23591338 Medicago truncatula
Medtr3g059000 0.5kb downstream 0.5kb downstream 5048 true chr3: 23585791-23590838 Medicago truncatula
Medtr3g059000 0.5kb downstream 0.5kb downstream 500 false chr3: 23585791-23586290 Medicago truncatula
Medtr3g059000 1.0kb upstream 1.0kb upstream 5548 true chr3: 23586291-23591838 Medicago truncatula
Medtr3g059000 1.0kb upstream 1.0kb upstream 1000 false chr3: 23590839-23591838 Medicago truncatula
Medtr3g059000 1.0kb downstream 1.0kb downstream 5548 true chr3: 23585291-23590838 Medicago truncatula
Medtr3g059000 1.0kb downstream 1.0kb downstream 1000 false chr3: 23585291-23586290 Medicago truncatula
Medtr3g059000 2.0kb upstream 2.0kb upstream 6548 true chr3: 23586291-23592838 Medicago truncatula
Medtr3g059000 2.0kb upstream 2.0kb upstream 2000 false chr3: 23590839-23592838 Medicago truncatula
Medtr3g059000 2.0kb downstream 2.0kb downstream 6548 true chr3: 23584291-23590838 Medicago truncatula
Medtr3g059000 2.0kb downstream 2.0kb downstream 2000 false chr3: 23584291-23586290 Medicago truncatula
Medtr3g059000 5.0kb upstream 5.0kb upstream 9548 true chr3: 23586291-23595838 Medicago truncatula
Medtr3g059000 5.0kb upstream 5.0kb upstream 5000 false chr3: 23590839-23595838 Medicago truncatula
Medtr3g059000 5.0kb downstream 5.0kb downstream 9548 true chr3: 23581291-23590838 Medicago truncatula
Medtr3g059000 5.0kb downstream 5.0kb downstream 5000 false chr3: 23581291-23586290 Medicago truncatula
Medtr3g059000 10.0kb upstream 10.0kb upstream 14548 true chr3: 23586291-23600838 Medicago truncatula
Medtr3g059000 10.0kb upstream 10.0kb upstream 10000 false chr3: 23590839-23600838 Medicago truncatula
Medtr3g059000 10.0kb downstream 10.0kb downstream 14548 true chr3: 23576291-23590838 Medicago truncatula
Medtr3g059000 10.0kb downstream 10.0kb downstream 10000 false chr3: 23576291-23586290 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305857 5265 Fabidae View MSA
124074080 5270 Rosid View MSA
123752674 5271 Pentapetalae View MSA
122796288 5272 Eudicot View MSA
122042872 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349327 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.724     High High
cufflinks 24.079     High  
cufflinks 29.383     High  
cufflinks 29.788     High  
cufflinks 23.23     High  
cufflinks 16.228     High Low
cufflinks 37.02     High  
cufflinks 26.616     High  
cufflinks 38.76     High High

0 Strain