Gene : Medtr3g058620 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15680:SF9 - 39S RIBOSOMAL PROTEIN L19, MITOCHONDRIAL Description:  50S ribosomal protein L19-2
Genomic Order:  2420 Name:  ? Medtr3g058620
Secondary Identifier:  ? PAC:31053316
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g058620 0.5kb upstream 0.5kb upstream 4692 true chr3: 23311920-23316611 Medicago truncatula
Medtr3g058620 0.5kb upstream 0.5kb upstream 500 false chr3: 23316112-23316611 Medicago truncatula
Medtr3g058620 0.5kb downstream 0.5kb downstream 4692 true chr3: 23311420-23316111 Medicago truncatula
Medtr3g058620 0.5kb downstream 0.5kb downstream 500 false chr3: 23311420-23311919 Medicago truncatula
Medtr3g058620 1.0kb upstream 1.0kb upstream 5192 true chr3: 23311920-23317111 Medicago truncatula
Medtr3g058620 1.0kb upstream 1.0kb upstream 1000 false chr3: 23316112-23317111 Medicago truncatula
Medtr3g058620 1.0kb downstream 1.0kb downstream 5192 true chr3: 23310920-23316111 Medicago truncatula
Medtr3g058620 1.0kb downstream 1.0kb downstream 1000 false chr3: 23310920-23311919 Medicago truncatula
Medtr3g058620 2.0kb upstream 2.0kb upstream 6192 true chr3: 23311920-23318111 Medicago truncatula
Medtr3g058620 2.0kb upstream 2.0kb upstream 2000 false chr3: 23316112-23318111 Medicago truncatula
Medtr3g058620 2.0kb downstream 2.0kb downstream 6192 true chr3: 23309920-23316111 Medicago truncatula
Medtr3g058620 2.0kb downstream 2.0kb downstream 2000 false chr3: 23309920-23311919 Medicago truncatula
Medtr3g058620 5.0kb upstream 5.0kb upstream 9192 true chr3: 23311920-23321111 Medicago truncatula
Medtr3g058620 5.0kb upstream 5.0kb upstream 5000 false chr3: 23316112-23321111 Medicago truncatula
Medtr3g058620 5.0kb downstream 5.0kb downstream 9192 true chr3: 23306920-23316111 Medicago truncatula
Medtr3g058620 5.0kb downstream 5.0kb downstream 5000 false chr3: 23306920-23311919 Medicago truncatula
Medtr3g058620 10.0kb upstream 10.0kb upstream 14192 true chr3: 23311920-23326111 Medicago truncatula
Medtr3g058620 10.0kb upstream 10.0kb upstream 10000 false chr3: 23316112-23326111 Medicago truncatula
Medtr3g058620 10.0kb downstream 10.0kb downstream 14192 true chr3: 23301920-23316111 Medicago truncatula
Medtr3g058620 10.0kb downstream 10.0kb downstream 10000 false chr3: 23301920-23311919 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312968 5265 Fabidae View MSA
124072223 5270 Rosid View MSA
123746974 5271 Pentapetalae View MSA
122793456 5272 Eudicot View MSA
122044043 5273 Angiosperm View MSA
123428995 5275 Viridiplantae View MSA
121349577 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.239        
cufflinks 4.387       Low
cufflinks 8.04        
cufflinks 10.045     High  
cufflinks 8.629        
cufflinks 7.351        
cufflinks 8.766        
cufflinks 6.301        
cufflinks 10.597     High High

0 Strain