Gene : Medtr3g062840 M. truncatula Mt4.0v1
Defline:  (1 of 7) PF06697 - Protein of unknown function (DUF1191) (DUF1191) Description:  plant/F17O14-7 protein
Genomic Order:  3049 Name:  ? Medtr3g062840
Secondary Identifier:  ? PAC:31053305
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g062840 0.5kb upstream 0.5kb upstream 2230 true chr3: 28399252-28401481 Medicago truncatula
Medtr3g062840 0.5kb upstream 0.5kb upstream 500 false chr3: 28400982-28401481 Medicago truncatula
Medtr3g062840 0.5kb downstream 0.5kb downstream 2230 true chr3: 28398752-28400981 Medicago truncatula
Medtr3g062840 0.5kb downstream 0.5kb downstream 500 false chr3: 28398752-28399251 Medicago truncatula
Medtr3g062840 1.0kb upstream 1.0kb upstream 2730 true chr3: 28399252-28401981 Medicago truncatula
Medtr3g062840 1.0kb upstream 1.0kb upstream 1000 false chr3: 28400982-28401981 Medicago truncatula
Medtr3g062840 1.0kb downstream 1.0kb downstream 2730 true chr3: 28398252-28400981 Medicago truncatula
Medtr3g062840 1.0kb downstream 1.0kb downstream 1000 false chr3: 28398252-28399251 Medicago truncatula
Medtr3g062840 2.0kb upstream 2.0kb upstream 3730 true chr3: 28399252-28402981 Medicago truncatula
Medtr3g062840 2.0kb upstream 2.0kb upstream 2000 false chr3: 28400982-28402981 Medicago truncatula
Medtr3g062840 2.0kb downstream 2.0kb downstream 3730 true chr3: 28397252-28400981 Medicago truncatula
Medtr3g062840 2.0kb downstream 2.0kb downstream 2000 false chr3: 28397252-28399251 Medicago truncatula
Medtr3g062840 5.0kb upstream 5.0kb upstream 6730 true chr3: 28399252-28405981 Medicago truncatula
Medtr3g062840 5.0kb upstream 5.0kb upstream 5000 false chr3: 28400982-28405981 Medicago truncatula
Medtr3g062840 5.0kb downstream 5.0kb downstream 6730 true chr3: 28394252-28400981 Medicago truncatula
Medtr3g062840 5.0kb downstream 5.0kb downstream 5000 false chr3: 28394252-28399251 Medicago truncatula
Medtr3g062840 10.0kb upstream 10.0kb upstream 11730 true chr3: 28399252-28410981 Medicago truncatula
Medtr3g062840 10.0kb upstream 10.0kb upstream 10000 false chr3: 28400982-28410981 Medicago truncatula
Medtr3g062840 10.0kb downstream 10.0kb downstream 11730 true chr3: 28389252-28400981 Medicago truncatula
Medtr3g062840 10.0kb downstream 10.0kb downstream 10000 false chr3: 28389252-28399251 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041468 5273 Angiosperm View MSA
122297217 5265 Fabidae View MSA
124035949 5270 Rosid View MSA
123742740 5271 Pentapetalae View MSA
122795856 5272 Eudicot View MSA
121351350 5274 Embryophyte View MSA
123382132 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.251        
cufflinks 0.495        
cufflinks 0.292        
cufflinks 0.109       Low
cufflinks 1.372       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.243        
cufflinks 0.304        
cufflinks 0.461        

0 Strain