Gene : Medtr3g063310 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31852:SF1 - LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED Description:  late embryogenesis abundant hydroxyproline-rich glycoprotein
Genomic Order:  3087 Name:  ? Medtr3g063310
Secondary Identifier:  ? PAC:31058781
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g063310 0.5kb upstream 0.5kb upstream 1698 true chr3: 28678057-28679754 Medicago truncatula
Medtr3g063310 0.5kb upstream 0.5kb upstream 500 false chr3: 28678057-28678556 Medicago truncatula
Medtr3g063310 0.5kb downstream 0.5kb downstream 1698 true chr3: 28678557-28680254 Medicago truncatula
Medtr3g063310 0.5kb downstream 0.5kb downstream 500 false chr3: 28679755-28680254 Medicago truncatula
Medtr3g063310 1.0kb upstream 1.0kb upstream 2198 true chr3: 28677557-28679754 Medicago truncatula
Medtr3g063310 1.0kb upstream 1.0kb upstream 1000 false chr3: 28677557-28678556 Medicago truncatula
Medtr3g063310 1.0kb downstream 1.0kb downstream 2198 true chr3: 28678557-28680754 Medicago truncatula
Medtr3g063310 1.0kb downstream 1.0kb downstream 1000 false chr3: 28679755-28680754 Medicago truncatula
Medtr3g063310 2.0kb upstream 2.0kb upstream 3198 true chr3: 28676557-28679754 Medicago truncatula
Medtr3g063310 2.0kb upstream 2.0kb upstream 2000 false chr3: 28676557-28678556 Medicago truncatula
Medtr3g063310 2.0kb downstream 2.0kb downstream 3198 true chr3: 28678557-28681754 Medicago truncatula
Medtr3g063310 2.0kb downstream 2.0kb downstream 2000 false chr3: 28679755-28681754 Medicago truncatula
Medtr3g063310 5.0kb upstream 5.0kb upstream 6198 true chr3: 28673557-28679754 Medicago truncatula
Medtr3g063310 5.0kb upstream 5.0kb upstream 5000 false chr3: 28673557-28678556 Medicago truncatula
Medtr3g063310 5.0kb downstream 5.0kb downstream 6198 true chr3: 28678557-28684754 Medicago truncatula
Medtr3g063310 5.0kb downstream 5.0kb downstream 5000 false chr3: 28679755-28684754 Medicago truncatula
Medtr3g063310 10.0kb upstream 10.0kb upstream 11198 true chr3: 28668557-28679754 Medicago truncatula
Medtr3g063310 10.0kb upstream 10.0kb upstream 10000 false chr3: 28668557-28678556 Medicago truncatula
Medtr3g063310 10.0kb downstream 10.0kb downstream 11198 true chr3: 28678557-28689754 Medicago truncatula
Medtr3g063310 10.0kb downstream 10.0kb downstream 10000 false chr3: 28679755-28689754 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313282 5265 Fabidae View MSA
124063776 5270 Rosid View MSA
123751487 5271 Pentapetalae View MSA
122787858 5272 Eudicot View MSA
122044505 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.519        
cufflinks 0.064     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 36.207     High  
cufflinks 0.019     Low Low
cufflinks 30.184     High  
cufflinks 36.611     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 22.471     High  

0 Strain