Gene : Medtr3g063180 M. truncatula Mt4.0v1
Defline:  (1 of 4) 1.14.11.19 - Leucocyanidin oxygenase / Leucoanthocyanidin dioxygenase Description:  leucoanthocyanidin dioxygenase-like protein
Genomic Order:  3080 Name:  ? Medtr3g063180
Secondary Identifier:  ? PAC:31057212
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5125 Medicago truncatula pathologic  
Mtruncatula PWY-641 Medicago truncatula pathologic  
Mtruncatula PWY-7267 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g063180 0.5kb upstream 0.5kb upstream 3341 true chr3: 28589079-28592419 Medicago truncatula
Medtr3g063180 0.5kb upstream 0.5kb upstream 500 false chr3: 28591920-28592419 Medicago truncatula
Medtr3g063180 0.5kb downstream 0.5kb downstream 3341 true chr3: 28588579-28591919 Medicago truncatula
Medtr3g063180 0.5kb downstream 0.5kb downstream 500 false chr3: 28588579-28589078 Medicago truncatula
Medtr3g063180 1.0kb upstream 1.0kb upstream 3841 true chr3: 28589079-28592919 Medicago truncatula
Medtr3g063180 1.0kb upstream 1.0kb upstream 1000 false chr3: 28591920-28592919 Medicago truncatula
Medtr3g063180 1.0kb downstream 1.0kb downstream 3841 true chr3: 28588079-28591919 Medicago truncatula
Medtr3g063180 1.0kb downstream 1.0kb downstream 1000 false chr3: 28588079-28589078 Medicago truncatula
Medtr3g063180 2.0kb upstream 2.0kb upstream 4841 true chr3: 28589079-28593919 Medicago truncatula
Medtr3g063180 2.0kb upstream 2.0kb upstream 2000 false chr3: 28591920-28593919 Medicago truncatula
Medtr3g063180 2.0kb downstream 2.0kb downstream 4841 true chr3: 28587079-28591919 Medicago truncatula
Medtr3g063180 2.0kb downstream 2.0kb downstream 2000 false chr3: 28587079-28589078 Medicago truncatula
Medtr3g063180 5.0kb upstream 5.0kb upstream 7841 true chr3: 28589079-28596919 Medicago truncatula
Medtr3g063180 5.0kb upstream 5.0kb upstream 5000 false chr3: 28591920-28596919 Medicago truncatula
Medtr3g063180 5.0kb downstream 5.0kb downstream 7841 true chr3: 28584079-28591919 Medicago truncatula
Medtr3g063180 5.0kb downstream 5.0kb downstream 5000 false chr3: 28584079-28589078 Medicago truncatula
Medtr3g063180 10.0kb upstream 10.0kb upstream 12841 true chr3: 28589079-28601919 Medicago truncatula
Medtr3g063180 10.0kb upstream 10.0kb upstream 10000 false chr3: 28591920-28601919 Medicago truncatula
Medtr3g063180 10.0kb downstream 10.0kb downstream 12841 true chr3: 28579079-28591919 Medicago truncatula
Medtr3g063180 10.0kb downstream 10.0kb downstream 10000 false chr3: 28579079-28589078 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026742 5273 Angiosperm View MSA
122303051 5265 Fabidae View MSA
124062764 5270 Rosid View MSA
123736643 5271 Pentapetalae View MSA
122786747 5272 Eudicot View MSA
121347125 5274 Embryophyte View MSA
123380497 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.655        
cufflinks 1.352       Low
cufflinks 2.107        
cufflinks 2.252        
cufflinks 1.916        
cufflinks 1.859        
cufflinks 2.089        
cufflinks 1.32       Low
cufflinks 3.725       High

0 Strain