Gene : Medtr3g064560 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22870:SF177 - F12P19.9 PROTEIN Description:  regulator of chromosome condensation (RCC1) family protein
Genomic Order:  3153 Name:  ? Medtr3g064560
Secondary Identifier:  ? PAC:31061491
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g064560 0.5kb upstream 0.5kb upstream 6560 true chr3: 29088874-29095433 Medicago truncatula
Medtr3g064560 0.5kb upstream 0.5kb upstream 500 false chr3: 29088874-29089373 Medicago truncatula
Medtr3g064560 0.5kb downstream 0.5kb downstream 6560 true chr3: 29089374-29095933 Medicago truncatula
Medtr3g064560 0.5kb downstream 0.5kb downstream 500 false chr3: 29095434-29095933 Medicago truncatula
Medtr3g064560 1.0kb upstream 1.0kb upstream 7060 true chr3: 29088374-29095433 Medicago truncatula
Medtr3g064560 1.0kb upstream 1.0kb upstream 1000 false chr3: 29088374-29089373 Medicago truncatula
Medtr3g064560 1.0kb downstream 1.0kb downstream 7060 true chr3: 29089374-29096433 Medicago truncatula
Medtr3g064560 1.0kb downstream 1.0kb downstream 1000 false chr3: 29095434-29096433 Medicago truncatula
Medtr3g064560 2.0kb upstream 2.0kb upstream 8060 true chr3: 29087374-29095433 Medicago truncatula
Medtr3g064560 2.0kb upstream 2.0kb upstream 2000 false chr3: 29087374-29089373 Medicago truncatula
Medtr3g064560 2.0kb downstream 2.0kb downstream 8060 true chr3: 29089374-29097433 Medicago truncatula
Medtr3g064560 2.0kb downstream 2.0kb downstream 2000 false chr3: 29095434-29097433 Medicago truncatula
Medtr3g064560 5.0kb upstream 5.0kb upstream 11060 true chr3: 29084374-29095433 Medicago truncatula
Medtr3g064560 5.0kb upstream 5.0kb upstream 5000 false chr3: 29084374-29089373 Medicago truncatula
Medtr3g064560 5.0kb downstream 5.0kb downstream 11060 true chr3: 29089374-29100433 Medicago truncatula
Medtr3g064560 5.0kb downstream 5.0kb downstream 5000 false chr3: 29095434-29100433 Medicago truncatula
Medtr3g064560 10.0kb upstream 10.0kb upstream 16060 true chr3: 29079374-29095433 Medicago truncatula
Medtr3g064560 10.0kb upstream 10.0kb upstream 10000 false chr3: 29079374-29089373 Medicago truncatula
Medtr3g064560 10.0kb downstream 10.0kb downstream 16060 true chr3: 29089374-29105433 Medicago truncatula
Medtr3g064560 10.0kb downstream 10.0kb downstream 10000 false chr3: 29095434-29105433 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309911 5265 Fabidae View MSA
124072280 5270 Rosid View MSA
123747900 5271 Pentapetalae View MSA
122788222 5272 Eudicot View MSA
122050180 5273 Angiosperm View MSA
121311783 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.042     Low  
cufflinks 0.231        
cufflinks 0.333        
cufflinks 0.028     Low Low
cufflinks 0.528       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low  
cufflinks 0.232        
cufflinks 0.061     Low  

0 Strain