Gene : Medtr3g098990 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13468:SF6 - DEK DOMAIN-CONTAINING CHROMATIN ASSOCIATED PROTEIN Description:  DEK domain chromatin associated protein
Genomic Order:  5374 Name:  ? Medtr3g098990
Secondary Identifier:  ? PAC:31061572
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g098990 0.5kb upstream 0.5kb upstream 6150 true chr3: 45359585-45365734 Medicago truncatula
Medtr3g098990 0.5kb upstream 0.5kb upstream 500 false chr3: 45365235-45365734 Medicago truncatula
Medtr3g098990 0.5kb downstream 0.5kb downstream 6150 true chr3: 45359085-45365234 Medicago truncatula
Medtr3g098990 0.5kb downstream 0.5kb downstream 500 false chr3: 45359085-45359584 Medicago truncatula
Medtr3g098990 1.0kb upstream 1.0kb upstream 6650 true chr3: 45359585-45366234 Medicago truncatula
Medtr3g098990 1.0kb upstream 1.0kb upstream 1000 false chr3: 45365235-45366234 Medicago truncatula
Medtr3g098990 1.0kb downstream 1.0kb downstream 6650 true chr3: 45358585-45365234 Medicago truncatula
Medtr3g098990 1.0kb downstream 1.0kb downstream 1000 false chr3: 45358585-45359584 Medicago truncatula
Medtr3g098990 2.0kb upstream 2.0kb upstream 7650 true chr3: 45359585-45367234 Medicago truncatula
Medtr3g098990 2.0kb upstream 2.0kb upstream 2000 false chr3: 45365235-45367234 Medicago truncatula
Medtr3g098990 2.0kb downstream 2.0kb downstream 7650 true chr3: 45357585-45365234 Medicago truncatula
Medtr3g098990 2.0kb downstream 2.0kb downstream 2000 false chr3: 45357585-45359584 Medicago truncatula
Medtr3g098990 5.0kb upstream 5.0kb upstream 10650 true chr3: 45359585-45370234 Medicago truncatula
Medtr3g098990 5.0kb upstream 5.0kb upstream 5000 false chr3: 45365235-45370234 Medicago truncatula
Medtr3g098990 5.0kb downstream 5.0kb downstream 10650 true chr3: 45354585-45365234 Medicago truncatula
Medtr3g098990 5.0kb downstream 5.0kb downstream 5000 false chr3: 45354585-45359584 Medicago truncatula
Medtr3g098990 10.0kb upstream 10.0kb upstream 15650 true chr3: 45359585-45375234 Medicago truncatula
Medtr3g098990 10.0kb upstream 10.0kb upstream 10000 false chr3: 45365235-45375234 Medicago truncatula
Medtr3g098990 10.0kb downstream 10.0kb downstream 15650 true chr3: 45349585-45365234 Medicago truncatula
Medtr3g098990 10.0kb downstream 10.0kb downstream 10000 false chr3: 45349585-45359584 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301714 5265 Fabidae View MSA
124072894 5270 Rosid View MSA
123748946 5271 Pentapetalae View MSA
122791456 5272 Eudicot View MSA
122042773 5273 Angiosperm View MSA
121346519 5274 Embryophyte View MSA
123426401 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.33     High High
cufflinks 6.66        
cufflinks 5.724       Low
cufflinks 7.832        
cufflinks 7.079        
cufflinks 6.992        
cufflinks 12.762     High High
cufflinks 5.302       Low
cufflinks 10.294        

0 Strain