Gene : Medtr3g099010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12300//PTHR12300:SF58 - HVA22-LIKE PROTEINS Description:  TB2/DP1, HVA22 family protein
Genomic Order:  5376 Name:  ? Medtr3g099010
Secondary Identifier:  ? PAC:31059495
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g099010 0.5kb upstream 0.5kb upstream 2044 true chr3: 45376940-45378983 Medicago truncatula
Medtr3g099010 0.5kb upstream 0.5kb upstream 500 false chr3: 45378484-45378983 Medicago truncatula
Medtr3g099010 0.5kb downstream 0.5kb downstream 2044 true chr3: 45376440-45378483 Medicago truncatula
Medtr3g099010 0.5kb downstream 0.5kb downstream 500 false chr3: 45376440-45376939 Medicago truncatula
Medtr3g099010 1.0kb upstream 1.0kb upstream 2544 true chr3: 45376940-45379483 Medicago truncatula
Medtr3g099010 1.0kb upstream 1.0kb upstream 1000 false chr3: 45378484-45379483 Medicago truncatula
Medtr3g099010 1.0kb downstream 1.0kb downstream 2544 true chr3: 45375940-45378483 Medicago truncatula
Medtr3g099010 1.0kb downstream 1.0kb downstream 1000 false chr3: 45375940-45376939 Medicago truncatula
Medtr3g099010 2.0kb upstream 2.0kb upstream 3544 true chr3: 45376940-45380483 Medicago truncatula
Medtr3g099010 2.0kb upstream 2.0kb upstream 2000 false chr3: 45378484-45380483 Medicago truncatula
Medtr3g099010 2.0kb downstream 2.0kb downstream 3544 true chr3: 45374940-45378483 Medicago truncatula
Medtr3g099010 2.0kb downstream 2.0kb downstream 2000 false chr3: 45374940-45376939 Medicago truncatula
Medtr3g099010 5.0kb upstream 5.0kb upstream 6544 true chr3: 45376940-45383483 Medicago truncatula
Medtr3g099010 5.0kb upstream 5.0kb upstream 5000 false chr3: 45378484-45383483 Medicago truncatula
Medtr3g099010 5.0kb downstream 5.0kb downstream 6544 true chr3: 45371940-45378483 Medicago truncatula
Medtr3g099010 5.0kb downstream 5.0kb downstream 5000 false chr3: 45371940-45376939 Medicago truncatula
Medtr3g099010 10.0kb upstream 10.0kb upstream 11544 true chr3: 45376940-45388483 Medicago truncatula
Medtr3g099010 10.0kb upstream 10.0kb upstream 10000 false chr3: 45378484-45388483 Medicago truncatula
Medtr3g099010 10.0kb downstream 10.0kb downstream 11544 true chr3: 45366940-45378483 Medicago truncatula
Medtr3g099010 10.0kb downstream 10.0kb downstream 10000 false chr3: 45366940-45376939 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312000 5265 Fabidae View MSA
124062938 5270 Rosid View MSA
123747497 5271 Pentapetalae View MSA
122794612 5272 Eudicot View MSA
122049450 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.831        
cufflinks 5.505        
cufflinks 2.945       Low
cufflinks 3.022       Low
cufflinks 5.902        
cufflinks 2.897       Low
cufflinks 9.341       High
cufflinks 5.115        
cufflinks 9.351       High

0 Strain