Gene : Medtr3g101470 M. truncatula Mt4.0v1
Defline:  (1 of 4) 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase Description:  NAD-dependent isocitrate dehydrogenase
Genomic Order:  5553 Name:  ? Medtr3g101470
Secondary Identifier:  ? PAC:31055534
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5464 Medicago truncatula pathologic  
Mtruncatula PWY-5690 Medicago truncatula pathologic  
Mtruncatula PWY-6549 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g101470 0.5kb upstream 0.5kb upstream 4016 true chr3: 46701687-46705702 Medicago truncatula
Medtr3g101470 0.5kb upstream 0.5kb upstream 500 false chr3: 46701687-46702186 Medicago truncatula
Medtr3g101470 0.5kb downstream 0.5kb downstream 4016 true chr3: 46702187-46706202 Medicago truncatula
Medtr3g101470 0.5kb downstream 0.5kb downstream 500 false chr3: 46705703-46706202 Medicago truncatula
Medtr3g101470 1.0kb upstream 1.0kb upstream 4516 true chr3: 46701187-46705702 Medicago truncatula
Medtr3g101470 1.0kb upstream 1.0kb upstream 1000 false chr3: 46701187-46702186 Medicago truncatula
Medtr3g101470 1.0kb downstream 1.0kb downstream 4516 true chr3: 46702187-46706702 Medicago truncatula
Medtr3g101470 1.0kb downstream 1.0kb downstream 1000 false chr3: 46705703-46706702 Medicago truncatula
Medtr3g101470 2.0kb upstream 2.0kb upstream 5516 true chr3: 46700187-46705702 Medicago truncatula
Medtr3g101470 2.0kb upstream 2.0kb upstream 2000 false chr3: 46700187-46702186 Medicago truncatula
Medtr3g101470 2.0kb downstream 2.0kb downstream 5516 true chr3: 46702187-46707702 Medicago truncatula
Medtr3g101470 2.0kb downstream 2.0kb downstream 2000 false chr3: 46705703-46707702 Medicago truncatula
Medtr3g101470 5.0kb upstream 5.0kb upstream 8516 true chr3: 46697187-46705702 Medicago truncatula
Medtr3g101470 5.0kb upstream 5.0kb upstream 5000 false chr3: 46697187-46702186 Medicago truncatula
Medtr3g101470 5.0kb downstream 5.0kb downstream 8516 true chr3: 46702187-46710702 Medicago truncatula
Medtr3g101470 5.0kb downstream 5.0kb downstream 5000 false chr3: 46705703-46710702 Medicago truncatula
Medtr3g101470 10.0kb upstream 10.0kb upstream 13516 true chr3: 46692187-46705702 Medicago truncatula
Medtr3g101470 10.0kb upstream 10.0kb upstream 10000 false chr3: 46692187-46702186 Medicago truncatula
Medtr3g101470 10.0kb downstream 10.0kb downstream 13516 true chr3: 46702187-46715702 Medicago truncatula
Medtr3g101470 10.0kb downstream 10.0kb downstream 10000 false chr3: 46705703-46715702 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302631 5265 Fabidae View MSA
124066571 5270 Rosid View MSA
123739712 5271 Pentapetalae View MSA
122792664 5272 Eudicot View MSA
122041698 5273 Angiosperm View MSA
121349734 5274 Embryophyte View MSA
123425496 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.402        
cufflinks 3.801        
cufflinks 4.2        
cufflinks 3.264        
cufflinks 5.175       High
cufflinks 1.684       Low
cufflinks 3.958        
cufflinks 3.512        
cufflinks 4.895        

0 Strain